Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0828 ATGTCAGAAACTCTTCGTTTGGGTGTTGCTGTTCTTGGCAATGTTGCCTCAGTATCTCTTTATGCTGCACCAATAACCACTTTTAAGAGGGTGATAAGGAAGAAAAGCACAGAAGAATTTTCATGCATTCCTTACATCATTGGGCTGTTTAATTGTCTCCTTTTTACTTGGTATGGTTTACCTGTTGTGAGCTATAAGTGGGAGAATTTACCTCTTGTTACAGTTAATGGAGTTGGAATTGTGCTTGAGTTATCCTATGTTCTCATTTATTTCTGCTATGCTTCTGCCAAGGGAAAGGCAAAGGTAACCATGGTAGCAACACCAGTTTTGCTACTATTCTGCATTACTGCTATAGTCTCAGCTTTTGCCTTCCATGATAATGCACACAGAAAACAACTTGTGGGTAGCATTGGCTTAGTTGTTTCAATAGCCATGTATGGATCTCCTCTTGTTGTAATGAAGAAAGTTATACAAACCAAGAGTGTGGAATTCATGCCACTACCCTTATCTTTGTGTACATTCTTAGCTACTACTCTTTGGTTAACTTATGGTGCTCTCATTCGTGATATATTCGTTGCGGGACCAAGTGTTGTTGGAATTCCATTGGGCATTCTTCAGCTTGTCCTTCATTGCAAATACCGAAAAAAGAGTGTTTTGGAAGAACCAAACAAAGGGGACATGGAAAAGGGTAACTTAGAGAAGGTGGAGTTAGAAAAGGTGAATATGGAAATGGAGGATGCTGAAAAGAATGTGTCAATTCATAAGAACAGCAACTTGTGA 780 0.3923 MSETLRLGVAVLGNVASVSLYAAPITTFKRVIRKKSTEEFSCIPYIIGLFNCLLFTWYGLPVVSYKWENLPLVTVNGVGIVLELSYVLIYFCYASAKGKAKVTMVATPVLLLFCITAIVSAFAFHDNAHRKQLVGSIGLVVSIAMYGSPLVVMKKVIQTKSVEFMPLPLSLCTFLATTLWLTYGALIRDIFVAGPSVVGIPLGILQLVLHCKYRKKSVLEEPNKGDMEKGNLEKVELEKVNMEMEDAEKNVSIHKNSNL* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0828 259 Coils Coil 237 257 - -
Lan3g0828 259 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 248 - -
Lan3g0828 259 Pfam Sugar efflux transporter for intercellular exchange 132 216 IPR004316 GO:0016021
Lan3g0828 259 Pfam Sugar efflux transporter for intercellular exchange 10 97 IPR004316 GO:0016021
Lan3g0828 259 Gene3D - 129 224 - -
Lan3g0828 259 Gene3D - 10 107 - -
Lan3g0828 259 PANTHER RAG1-ACTIVATING PROTEIN 1 4 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0828 Lan-Chr3 15698679 15700989 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0828 1 258 Miscellaneous Gene Families AT5G53190 55.385 5.16e-99 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0828 K15382 - gmx:100813119 404.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0740 15 16333055 16336598 Lan3g0828 3 15698679 15700989 LSH
Lan14g0572 14 12013057 12015299 Lan3g0828 3 15698679 15700989 LSH