Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0745 ATGGAGAAGAACCAGAAACAGAGCAACTCTGTTTTTATTCACTTGGTGGTGGTTCTGTTACTATGTTCCTCCTCTGTTTCGGTTTCAGAGAGGATTGTTCCTCTCTTGCAGAGTTACGAAAAACCCATTTTTAGATCGAACTTTCAAACCATTTATGACACTTCAAAGTATGGTGTATTTCATCTTAGTAATGGGTTGGCTCAAACTCCTCAAATGGGATGGAATAGTTGGAACTTCTTTGCCTGCAATATCAATGAAACTGTCATTAAGGAAACTGCTGATGCGCTGATATCAACTGGGTTGGCTGATATTGGCTATGTGTATGTCAACATAGATGATTGCTGGTCTAAAGCAACAAGAGATTCAAAGGGTCAACTGGTCCCGGATCCTAAGACATTCCCATCAGGAATCAAAGCTCTTGCAGATTATATACATGGGAAGGGACTCAAGATCGGTATATATTCTGATGCTGGGGCTTTTACATGTCAAGTCAGACCAGGGTCACTTTTCCATGAAAATGATGATGCAGATTTATTTGCCTCTTGGGGTATAGATTATTTGAAGTATGACAATTGTTTCAATCTTGGCATCCCACCAAAAAAAAGATATCCACCGATGCGTGATGCTCTCAATGCAACCGGACGTACGATTTTCTATTCACTGTGTGAATGGGGTGTTGATGACCCTGCCTTATGGGCCGGCACGGTTGGTAATAGTTGGCGCACAACCGATGACATCAATGATTCATGGGCAAGCATGACAACTATTGCCGATCTTAATGACAAGTGGGCTGCATATGCTGGTCCTGGAGGATGGAATGACCCAGATATGTTGGAAGTTGGCAATGGTGGCATGACTTACGAGGAATATCGTGCTCACTTCAGCATCTGGGCTTTGATGAAGGCTCCATTATTGATTGGTTGCGATGTAAGAAATTTAACTGCTGAAACACTTGAGATTTTGAGCAATAAGGAAGTCATTGCCGTAAATCAAGACCCACTTGGAGTCCAGGGAAGGAAGGTTTATGCTACTGGAAAAGATGGTTGCAGTGAGGTTTGGGCAGGTCCTTTATCAGGACATAGATTGGCTGTTGCTCTCTGGAACAGGTGCTCAAAAGTTGCTACTATAACAGCTCCATGGACAGCAGTTGGGCTTGAATCTGGAATTCGGGTTTCTGTACGGGATTTGTGGCAGCACAAGGTAGTAACTACAGATGCAGTATCCTCATTCAGTGCTAGTGTTAATGCTCATGATTCTCACCTCTATATTTTGGCTCCTGCTACACCATCTTACTCTGTACAATAG 1305 0.4299 MEKNQKQSNSVFIHLVVVLLLCSSSVSVSERIVPLLQSYEKPIFRSNFQTIYDTSKYGVFHLSNGLAQTPQMGWNSWNFFACNINETVIKETADALISTGLADIGYVYVNIDDCWSKATRDSKGQLVPDPKTFPSGIKALADYIHGKGLKIGIYSDAGAFTCQVRPGSLFHENDDADLFASWGIDYLKYDNCFNLGIPPKKRYPPMRDALNATGRTIFYSLCEWGVDDPALWAGTVGNSWRTTDDINDSWASMTTIADLNDKWAAYAGPGGWNDPDMLEVGNGGMTYEEYRAHFSIWALMKAPLLIGCDVRNLTAETLEILSNKEVIAVNQDPLGVQGRKVYATGKDGCSEVWAGPLSGHRLAVALWNRCSKVATITAPWTAVGLESGIRVSVRDLWQHKVVTTDAVSSFSASVNAHDSHLYILAPATPSYSVQ* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0745 434 PRINTS Glycosyl hydrolase family 27 signature 64 83 IPR002241 GO:0004553|GO:0005975
Lan3g0745 434 PRINTS Glycosyl hydrolase family 27 signature 100 115 IPR002241 GO:0004553|GO:0005975
Lan3g0745 434 PRINTS Glycosyl hydrolase family 27 signature 141 162 IPR002241 GO:0004553|GO:0005975
Lan3g0745 434 PRINTS Glycosyl hydrolase family 27 signature 175 192 IPR002241 GO:0004553|GO:0005975
Lan3g0745 434 PRINTS Glycosyl hydrolase family 27 signature 202 220 IPR002241 GO:0004553|GO:0005975
Lan3g0745 434 PRINTS Glycosyl hydrolase family 27 signature 267 286 IPR002241 GO:0004553|GO:0005975
Lan3g0745 434 PRINTS Glycosyl hydrolase family 27 signature 288 309 IPR002241 GO:0004553|GO:0005975
Lan3g0745 434 SUPERFAMILY Glycosyl hydrolase domain 334 426 - -
Lan3g0745 434 Gene3D Aldolase class I 62 334 IPR013785 -
Lan3g0745 434 SUPERFAMILY (Trans)glycosidases 61 333 IPR017853 -
Lan3g0745 434 Gene3D - 335 427 IPR013780 -
Lan3g0745 434 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 46 424 IPR002241 GO:0004553|GO:0005975
Lan3g0745 434 Pfam Alpha galactosidase C-terminal beta sandwich domain 348 424 IPR041233 -
Lan3g0745 434 CDD GH27 70 332 IPR002241 GO:0004553|GO:0005975
Lan3g0745 434 Pfam Alpha galactosidase A 69 332 IPR002241 GO:0004553|GO:0005975
Lan3g0745 434 ProSitePatterns Alpha-galactosidase signature. 105 121 IPR000111 GO:0004553|GO:0005975
Lan3g0745 434 PANTHER ALPHA-GALACTOSIDASE 3 46 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0745 Lan-Chr3 13883953 13891804 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0745 5 432 Glycoside Hydrolase AT3G56310 70.968 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0745 K07407 - gmx:100784072 743.421