Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan3g0674 | ATGGCGACGAGTATAGGCATTATGGACAGTGCTTACTTTGTTGGCAGGAACGAGATTCTGACTTGGATCAATAATCGTCTTCACCTTAACCTCTCCCGCATTGAAGAGGCTGCGTCAGGTGCTGTACAATGCCAGATGATGGACATGACATTTCCCGGTGTTGTTCCAATGCACAAGGTGAACTTTGATGCTAAGTCGGAGTATGATATGATTCAGAATTACAAAGTTCTGCAGGAAGTGTTCACCAAGTTAAAAATTCCTAAGCATATTGAAGTTAACAGACTTGTTAAAGGCCGACCCTTGGACAACTTGGAGTTCCTACAATGGCTGAAACGATATTGTGACTCTGTGAATGGTGGCATTATGAATGAGAACTATAATCCTGTGGAGCGTAGAAGTAAGGGTGGAAAGGACCGAAGTTCCAAGAGTAGTCTGAAGAGCACAAAATCACTGCCAACAACTACACTAAACAATTCTGGTTCAGGCGAAACACACACACTCAATCCTAATAACGCATCTGTGCCGAAGCAATTGAGGTCTAGTGGAGGAGCAGGTGGGGCTAATTCATCAGCAGAGGCGCAGGCTTTGTCCAAACAGGTTACGGATATGAAACTTTCAATGGAACTCTTGGAAAAAGAGCGAGATTTTTACTTTGCCAAGCTAAGGGATGTAGAAATCCTTTGTCAGGCTGCAGAACTGGAGAATGATCATGTGTGTGTCGCAATTAAAAAGATTCTGTATGCTGCTGATGCAAAGGAATCAGCACTAGATGAAGCTCAGGAATACCTTAACCAAATTTTGAATGATGTTGATGCTGAAGAAAACACAGAAGCTTGA | 837 | 0.4289 | MATSIGIMDSAYFVGRNEILTWINNRLHLNLSRIEEAASGAVQCQMMDMTFPGVVPMHKVNFDAKSEYDMIQNYKVLQEVFTKLKIPKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRSKGGKDRSSKSSLKSTKSLPTTTLNNSGSGETHTLNPNNASVPKQLRSSGGAGGANSSAEAQALSKQVTDMKLSMELLEKERDFYFAKLRDVEILCQAAELENDHVCVAIKKILYAADAKESALDEAQEYLNQILNDVDAEENTEA* | 279 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan3g0674 | 278 | Pfam | EB1-like C-terminal motif | 210 | 248 | IPR004953 | GO:0008017 | |
| Lan3g0674 | 278 | ProSiteProfiles | Calponin homology (CH) domain profile. | 13 | 115 | IPR001715 | GO:0005515 | |
| Lan3g0674 | 278 | Coils | Coil | 249 | 276 | - | - | |
| Lan3g0674 | 278 | ProSiteProfiles | EB1-C terminal (EB1-C) domain profile. | 185 | 255 | IPR004953 | GO:0008017 | |
| Lan3g0674 | 278 | Gene3D | - | 6 | 134 | IPR036872 | - | |
| Lan3g0674 | 278 | PANTHER | MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER 1B | 1 | 275 | - | - | |
| Lan3g0674 | 278 | Pfam | Calponin homology (CH) domain | 16 | 114 | IPR001715 | GO:0005515 | |
| Lan3g0674 | 278 | MobiDBLite | consensus disorder prediction | 124 | 195 | - | - | |
| Lan3g0674 | 278 | PANTHER | MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER | 1 | 275 | IPR027328 | GO:0008017 | |
| Lan3g0674 | 278 | Gene3D | - | 185 | 265 | - | - | |
| Lan3g0674 | 278 | SUPERFAMILY | Calponin-homology domain, CH-domain | 5 | 132 | IPR036872 | - | |
| Lan3g0674 | 278 | MobiDBLite | consensus disorder prediction | 145 | 195 | - | - | |
| Lan3g0674 | 278 | MobiDBLite | consensus disorder prediction | 130 | 144 | - | - | |
| Lan3g0674 | 278 | Coils | Coil | 193 | 213 | - | - | |
| Lan3g0674 | 278 | SUPERFAMILY | EB1 dimerisation domain-like | 193 | 251 | IPR036133 | GO:0008017 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan3g0674 | Lan-Chr3 | 11115708 | 11119801 | Dispersed/Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan3g0674 | K10436 | - | gmx:100808026 | 396.356 |