Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0608 ATGATAACCCTTTTAGACTTGTACCATGTCCTCACTGCAGTTGTGCCACTCTATGTAGCCATGATCCTAGCATATGGTTCAGTAAAATGGTGGAAAATCTTCAGCCCTGACCAGTGTTCAGGGATAAACCGTTTTGTTGCACTCTTTGCAGTTCCACTCCTCTCATTCCACTTTATCTCTACCAATAATCCTTACAAAATGAACTACAAGTTCATAGCTGCAGATTCATTGCAAAAAACCATAGTCTTAATAGTTCTTGCAATATGGTCAAGGTTCAGTTCAAGGGGTTCATTAGAATGGTCCATAACCCTATTTTCCTTGTCTACACTACCCAACACACTTGTTATGGGGATACCCTTACTTAAGGGTATGTATGGTGACTCATCAGGTACCCTTATGGTTCAGATTGTTGTTCTTCAGTGTATCATATGGTACACTTTGATGCTGTTCCTTTTTGAGTATAGGGGTGCAAGGCTTTTGATAGTGGAACAGTTTCCAGATACTGCAGGATCCATTATATCATTCAAAGTTGATTCTGATGTTTTATCATTGGATGGGAAAGAACCTCTTCAGACTGAAGCTGAAGTTGGTGAAGATGGGAAGCTTCATGTTACTGTGAGAAAGTCAACAAGTTCAAGGTCTGAGATTTTCTCTAGAAGGTCTCATGGTCCTAACTCTGGTGTTTCACTCACACCAAGGCCTTCTAACTTGACCAATGCTGAGATTTACTCTCTTCAGTCTTCTAGGAACCCTACACCTAGAGGGTCAAGTTTTAACCACAGTGATTTTTATTCCATGGTGAATGGGAGGAACATTAGTGGTGTGAGTCCAAGGCAATCAAATTTTGGAAACTTGGGTTATGATGAAGAGGGTGGTGGTAATGTTTCTAGAACAAATAATGGTTATCCCGGTCCTCCAAATAATGGGATCTTTTCTCCAGTTACTGGGTCTAAGAAGAAGGGTAATGGTGGTGATGGTGGAAAGGATCTACACATGTTTGTTTGGAGTTCAAGTGCTTCTCCTGTCTCAGAAGGTGGAATCCATGTGTTCAGAGGTGGTGATTATGGAAATGAGCTTGGTGGGGTAGCTTCTCACCACAAAGATTATGATGAGTTTGGCCACGATGAATTTAGCTTTAGAAACCGAACCGTGACAGATGGGGTGGACAAAGAGGGACCAGTACTTTCTAAACTTGGTTCAAGCTCCACAACTGAACTTCACCCCAAAAATTCTGAAGGTGAATCTAGACCCACTTCCATGCCACCTACTAGTGTTATGACCAGACTCATCTTGATAATGGTGTGGAGAAAGCTGATTAGGAATCCCAACACTTACTCTAGCCTCATTGGTCTTACTTGGTCCTTGATTTCATTCAGGTGGAATGTTGTGATGCCTGCAATTGTTGCTGGCTCAATATCAATCTTATCTAATGCAGGCCTTGGCATGGCAATGTTTAGCCTTGGGTTATTCATGGCATTGCAACCAAGAATTATTGCTTGTGGAAACTCTGTTGCTTCCTTTGCTATGGCAGTTCGTTTCCTTACTGGTCCTGCAGTCATGGCTGTTGCATCAATCGTTGTAGGACTAAGGGGAGTTCTGTTGCACATTGCTATTGTTCAGGCCGCCCTGCCACAAGGGATTGTGCCCTTCGTTTTTGCTAAGGAATACAATGTTCATCCAGACATACTTAGCACTGGGGTTATATTTGGGATGCTAATTGCTCTACCAATTACGCTGGTATACTACATTTTACTGGGGCTTTAA 1764 0.4223 MITLLDLYHVLTAVVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFISTNNPYKMNYKFIAADSLQKTIVLIVLAIWSRFSSRGSLEWSITLFSLSTLPNTLVMGIPLLKGMYGDSSGTLMVQIVVLQCIIWYTLMLFLFEYRGARLLIVEQFPDTAGSIISFKVDSDVLSLDGKEPLQTEAEVGEDGKLHVTVRKSTSSRSEIFSRRSHGPNSGVSLTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHSDFYSMVNGRNISGVSPRQSNFGNLGYDEEGGGNVSRTNNGYPGPPNNGIFSPVTGSKKKGNGGDGGKDLHMFVWSSSASPVSEGGIHVFRGGDYGNELGGVASHHKDYDEFGHDEFSFRNRTVTDGVDKEGPVLSKLGSSSTTELHPKNSEGESRPTSMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLTWSLISFRWNVVMPAIVAGSISILSNAGLGMAMFSLGLFMALQPRIIACGNSVASFAMAVRFLTGPAVMAVASIVVGLRGVLLHIAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILLGL* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0608 587 MobiDBLite consensus disorder prediction 396 422 - -
Lan3g0608 587 MobiDBLite consensus disorder prediction 213 235 - -
Lan3g0608 587 MobiDBLite consensus disorder prediction 302 325 - -
Lan3g0608 587 MobiDBLite consensus disorder prediction 388 422 - -
Lan3g0608 587 Pfam Membrane transport protein 9 582 IPR004776 GO:0016021|GO:0055085
Lan3g0608 587 TIGRFAM 2a69: auxin efflux carrier 1 587 IPR014024 -
Lan3g0608 587 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1 587 - -
Lan3g0608 587 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0608 Lan-Chr3 7217687 7221021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0608 1 578 Organic Solute Cotransporters AT1G73590 63.426 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0608 K13947 - jre:108983403 1024.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0844 10 12428424 12431467 Lan3g0608 3 7217687 7221021 LSH