Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0248 ATGCATATTGAAGAAGGTAGTGGTGGTAAACAAAAAATGGCAAATCTGGTTCCTGGGGTTCTATTGAAGCTTCTGCAGCATATGAACACAGATGTTAAGGTTGGTGGAGAACACAGATCATCACTTTTACAAGTTGTGAGCATTGTTCCAGCACTTTCAGGTGGTGAGTTATTCTCAAACCAAGGTTTTTATCTCAAGGTCTCAGATTCATCTCATGCTACTTATGTGTCTCTCCCTGATGAACATGATGATCTTATTCTCAGTGATAAGATTCAGTTAGGACAGTTTGTTTTTGTTGATAGGCTTGAGGCTGCTTCTCCTGTTCCAATCCTTCATGGGGTTAGGCCTGTCCCTGGTAGACACCCTTGTGTTGGAACCCCTGAAGATATTGTTGCAACTCATTCACTTGGTTTTCTTGATAATAATAGTGACAATGATAACAAGAACAGTAATAAGGGTAGGAATAGTTTTAGTTCTTGTAGTATAGATATGGATAGATCAAAATCTCCTAGGAAAGTTGTCGGAAATCGCGGTGTTGTTGGAGAGAAGGAGAAGGAGAAGAAAGTTATTAGATCATTGAATGTTGGTGGTGGTGGTGGTAGTGTTGGTATTAAGGAGGAGAAATCGGAGAAAAGAAGTGTTGTTCTTGCTGGATTAAAATCTCAGCCAACAAAACCAGCAGGAGCAGGACTGAAGGTTAATGTGAAGAAGGAAAAGGACTCATCTATGGCTCGATTGAGGTCTATGAATTCGCGGTCGATTCCTGTTCCTTTGTCGCCAGGTAGTTGCTATTCGTTGCCTAGTTCTTTTGAGAAGTTTGCCAATGGTGTCAAGCAGCATCAAGCAAAGGTTAAGGGAGTGGACAGACTTACTGGCAAGGTTGGTGTGGTGGATACAGGAAAGGCTGTCCGTTCGGCTAGTCCTGCTACGAGGAAAATTGGAATGGGAAATCCAATCACAAATTTGGTGCAGGGAATTGAGATGGGGGCTAAGGCGCTGCGTAAGAGCTGGGAAGGGGGTATAGAGGTTAAGACTAGAGAGACTTCCAAAGCAAGGGCAGCTACCAAGTATGATCGCGAGCCTGAAGTTCGTAGCTCGACTCATAGGACAAGTTTTTCAAGTGAGAGGTTGTCGTCTAAAGAGGAGAGCAGGATCCAAGCATCAACAAAGCCATCTAAGGAAGAGCATAAGAATCAAATATCTGTAAAGAAGGTTAATGCTAACGGAACTACGGAGGAACAAGGAAAGTCAAATAAGCAAAGAACGCCCATCGGAAAGAAATCAGCAGAAGGCTCAGACAACAGATTCCCCGGAAACATGGTCAAAGTTTCTCTAAATAGTAGAAAAGTGACAGATGCAAGTGTTCAGTGGGCTTCACTCCCATCTTCTATTTCAAAGCTTGGGAAGGAAGTAATGAAGCAAAGAGATGCAGCACAAATGGCAGCCACTGAGGCTATGCAAGAGGCTGCTGCTGCAGATAGTTTGCTGCAATGTCTGAGTATTTATTCGGAGCTAAGTAATTCTGCTAAGGAACAGAACCCACAGCCAGCAGTGGAGCAGTTTTTAACGCTGAATTCTAGCCTGAGTAGTACCAAGACGATTGCTGAATCCTTATCGAAACCCATTCCAGACAGTTCATCTCCAGATTCTGAAAGGAGCGCAATGGAAGAAGCACTAAAAGTAAAAACAGATAGACAAAAACATGCGGCTTCCTGGGTCCAAGCGGCCTTAGCCACGAATCTATCACCCTTTGCTGTTTTTACAAAAGAACCTCAATCATGCAGCTTTCCAGTTTCAAGCAATTCTCATAATCAAAAGGCTATTCTCGGAAGTCAATACATGTTAGTCCTACACAATTCAAGTGAAGACACTTTGTCAAAAGCTCCAGGAAAAACTCGCCCGACGGCTAATTCGAAGCATGGCTCACAAGGAACTGCTCGCAGACTAAGTGACGTGTTAGCGAATGGGCACAAGCAACAAGTCCAACAGCTCCCTGAATGGATTAAAGGAAACGGCCTCGACGAGGTGGTTAATCTGGCTGAAATTCTGCAATTACAATCTCGAGACTGGTTTTTGGGATTTGTCGAGAGATTCCTGGACACCGATGGCGACACTACCTTGTCAGATAATGGCCAAATAGCAGGTATGCTCACTCAACTGAAGAGTGTAAACGATTGGTTAGACGAGATTGGGTCAAACAAGGAGGACGACGAAGAATCATGCCAAATATCAGCTGAGACGATCGAACGATTGCGGAAGAAGATATACGAGTATCTTCTTACACATGTTGAATCTGCAGCTGCTGCACTCGGCGCTGGATCACAACCATCACCTCAGATTAAAACCAAAAGGTGA 2355 0.4382 MHIEEGSGGKQKMANLVPGVLLKLLQHMNTDVKVGGEHRSSLLQVVSIVPALSGGELFSNQGFYLKVSDSSHATYVSLPDEHDDLILSDKIQLGQFVFVDRLEAASPVPILHGVRPVPGRHPCVGTPEDIVATHSLGFLDNNSDNDNKNSNKGRNSFSSCSIDMDRSKSPRKVVGNRGVVGEKEKEKKVIRSLNVGGGGGSVGIKEEKSEKRSVVLAGLKSQPTKPAGAGLKVNVKKEKDSSMARLRSMNSRSIPVPLSPGSCYSLPSSFEKFANGVKQHQAKVKGVDRLTGKVGVVDTGKAVRSASPATRKIGMGNPITNLVQGIEMGAKALRKSWEGGIEVKTRETSKARAATKYDREPEVRSSTHRTSFSSERLSSKEESRIQASTKPSKEEHKNQISVKKVNANGTTEEQGKSNKQRTPIGKKSAEGSDNRFPGNMVKVSLNSRKVTDASVQWASLPSSISKLGKEVMKQRDAAQMAATEAMQEAAAADSLLQCLSIYSELSNSAKEQNPQPAVEQFLTLNSSLSSTKTIAESLSKPIPDSSSPDSERSAMEEALKVKTDRQKHAASWVQAALATNLSPFAVFTKEPQSCSFPVSSNSHNQKAILGSQYMLVLHNSSEDTLSKAPGKTRPTANSKHGSQGTARRLSDVLANGHKQQVQQLPEWIKGNGLDEVVNLAEILQLQSRDWFLGFVERFLDTDGDTTLSDNGQIAGMLTQLKSVNDWLDEIGSNKEDDEESCQISAETIERLRKKIYEYLLTHVESAAAALGAGSQPSPQIKTKR* 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0248 784 MobiDBLite consensus disorder prediction 535 560 - -
Lan3g0248 784 MobiDBLite consensus disorder prediction 535 549 - -
Lan3g0248 784 MobiDBLite consensus disorder prediction 140 177 - -
Lan3g0248 784 MobiDBLite consensus disorder prediction 374 401 - -
Lan3g0248 784 PANTHER DUF936 FAMILY PROTEIN 13 783 - -
Lan3g0248 784 PANTHER EXPRESSED PROTEIN 13 783 IPR010341 -
Lan3g0248 784 Pfam Plant protein of unknown function (DUF936) 16 770 IPR010341 -
Lan3g0248 784 MobiDBLite consensus disorder prediction 344 366 - -
Lan3g0248 784 MobiDBLite consensus disorder prediction 623 646 - -
Lan3g0248 784 MobiDBLite consensus disorder prediction 344 440 - -
Lan3g0248 784 MobiDBLite consensus disorder prediction 140 164 - -
Lan3g0248 784 MobiDBLite consensus disorder prediction 402 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0248 Lan-Chr3 1611094 1615406 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0248 - - lang:109358192 998.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g2163 6 32065541 32069847 Lan3g0248 3 1611094 1615406 LSH
Lan10g0310 10 2047071 2051201 Lan3g0248 3 1611094 1615406 LSH
Lan3g0248 3 1611094 1615406 Lan7g0184 7 1125022 1129409 PCT
Lan7g0184 7 1125022 1129409 Lan3g0248 3 1611094 1615406 PCT