Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0068 ATGGAATCACATCAGAGAAGAGGAATAGGAGGATTGGCGTCACTGTCGCCGTCGAAACCTCCGCGCTCACCGTCGCGAGATCTACGATCTGCGGATTCGAATTCTAATAAGTTTGACAAAGACAGAGGCGTAAATGTGCAGGTTTTGCTTCGTTGTAGGCCTTTGAGTGAAGATGACATGAAAGTGAATACGCCAGTTGTGATTTCGTGTAACGAAATTAGAAGAGAAGTTTCAGCTGTGCAAGTTGTAGCCAACAAACGTATCGACAGAACCTTTAATTTTGACAAGGTATTTGGTTCTACCTCTCAGCAGGCAGAACTGTATGACGAGGCAATATCACCTATTGTGCATGAAGTACTTGAGGGCTATAACTGCACAGTTTTCGCATATGGTCAAACAGGAACTGGGAAGACATACACGATGGAAGGAGGTGGAGGAGCGAAGAATGGCGAATTTCCAAGTGATGCTGGTGTCATCCCAAGAGCTGTGAAACAGATATTTGAAATATTAGAAGCTCAGAATGTTGAGTATAACATGAAAGTGACATTTTTGGAGCTTTACAATGAGGAATTAACAGATCTTCTGGCTCCTGAGGAGACTTCAACATTTGTGGATTATAAGTCTAAGAAACCTATTGCTCTGATGGAGGATGGGAAAGGGGGTGTTTTTGTCAGAGGCTTAGAAGAAGAAATTGTTTGTACCGCAAATGAAATTTACAAGATACTGGAAAAGGGATCTGCAAAAAGGCATACAGTTGAGACACTTCTTAACAAACAAAGCAGTCGTTCTCATTCCATATTTGCTATCACAATTCATATTAAGGAGTGTACTCCAGAGGGTGAAGAAATGATTAAATGTGGGAAGCTAAATCTTGTGGACCTTGCGGGCTCCGAGAACATTTCACGTTCTGGTGCAAGAGAGGGTAGAGCAAGGGAGGCTGGGGAGATAAATAAAAGTTTGCTTACACTTGGCCGAGTGATTAATGCTCTAGTTGACCACTCAGGTCATGTTCCATACAGGGATAGCAAATTAACCAGACTGTTGCGGGATTCATTGGGTGGTAAAACCAAGACATGCATTATTGCCACAATATCACCTTCCATTCACTGCGTGGAAGAAACCCTTAGTACCTTGGATTATGCACACCGTGCTAAAAATATCAAGAACAAACCAGAGATCAATCAGAAAATGACGAAATCTGCAATGATTAAGGATTTGTATTCTGAAATTGACAGACTGAAGCGAGAGGTCTATGCTGCAAGAGAGAAGAATGGAATATATATACCACGTGACCGTTATCTTCATGAAGAAGCAGAGAAGAAGGCCATGGCTGAAAAGATAGAACAAATGGAACAAGGAACAAAGTCTAAGGATAAGCAACTGATGGAGCTTCAAGAACTCTACAATTCTCAGCAACTTTTGACTGCTGAACTAAGTGATAAACTTGAAAAGACTGAGAGAAGTCTTCAAGTAACTGAGCAGTCATTGTTTGATCTTGAGGAAAGGCACAAACAAGTAAATGCGACAATTAAGGAAAAGGAATTTCTTATAACGAATCTCTTGAATTCTGAGAGAGCACTTGTGGAGCGTGCAAATGAACTACGAGCAGAGCTTGAGAATGCTGCATCGGATGTGTCAAACCTGTTCTCTAAAATTGAGCGGAAGGATAAAATTGAAGAAGGAAATAGATTACTTATCCAAAAATTCCAGTCTCAGTTAGCTCAACAGCTTGAAGTTTTGCACAAGACAGTTTCAGCATCTGTAATGCATCAAGAACAACAATTAAAGGACATGGAGGAAGATATGCAGTCTTTTGTATCAACAAAGGCAGAGGCTACTAAAGATCTTAGAGTAAGGGTTGAAAAGTTGAAAAATATGCATGGTTCTGGTATTAAAGCTTTGGATAATTTAGCCGAGGAGCTTAAAGGAAATAACCAGTTAACTTATGAAGACTTGAATTCTCAAGTAGCCAAGCATTCATCTGCCTTGGAGGATGTTTTTAAAGGAATTGCCTTAGAAGCTGATTTGTTATTAAGTGACCTTCAAAGTAGTCTCCATAATCAGGAGGCCAATTTAATTGCTTATGCTCATCAGCAACGAGTGGCACATGCCAGAGCAATTGACACTACACGTGCAGTATCTAAAATAACAGTTAACTTCTTTGAGACGATAGACAGGCATGCATCAAGTCTGACCCAAATTGTGGAAGAAGCACAATTTGTCAATGATCAGAAGCTGTGTGAACTCGAAAAGAAGTTTAAGGAGTGTACTGCTTATGAAGAAAAGCAATTATTGGAGAAGGTGGCAGAAATGCTAGCAAGTTCAAATTCCAGAAAGAAAAAACTGGTTCAAATGGCAGTAAATGATCTTCGGGAAAGTGCAAAAAGCAGCACTGGTAAACTGCGGCAAGAAGCATTAACCATGCAGGACTCCACTTCTTCTGTCAAGGAAGAATGGAGAGATCACATGGAAAAGACAGAGTCCAACTACGATGAGGATACTTCTGCTGTAGAATCTGGAAAGGCAGACCTTGTGAAGGTTCTTCAAATCTGCCTCAACAAGGCAGAAGTAGGTTCACAACAATGGAAGAATGCCCAAGAGTCCTTGCTAAGTTTAGAGAAGAGAAATGCTGCTTCTGTGGATAGTATTATTAGGGGGGGAATAGAAGCTAATCAAGTTCTACGTGCTCGATTCTCAAGTGCTGTGTCAACTACACTTGAAGATGCAGATTTAGCAAACAAGGATATCAACTCATCCATTGATTATTCATTGCAACTTGATCATGAAGCTTGTGGGAATCTGAACTCTACGATCGTCCCATGTTGTGGTGATTTGAGAGAACTGAAGGGTACTCATTACCACAAAATTGTAGAGATAACTGAAAATGCAGGGAACTGTCTTCTCAACGAATACATGATGGTTGACGAACCATCTTGTTCGACACCGAGAAAGAGACCCATCAATTTACCAAGTGTTTCATCCTTAGAGGAACTAAGAACTCCATCATTTGAGGAACTATTGAAGTCATTCTGGGATGCAAAATCTCTAAAACAAGGAAATGGAGATGTCAAACATATTGGTGCACTTGAAGCCACTCAATCAGTAGGACAAATTAAATAA 3120 0.4045 MESHQRRGIGGLASLSPSKPPRSPSRDLRSADSNSNKFDKDRGVNVQVLLRCRPLSEDDMKVNTPVVISCNEIRREVSAVQVVANKRIDRTFNFDKVFGSTSQQAELYDEAISPIVHEVLEGYNCTVFAYGQTGTGKTYTMEGGGGAKNGEFPSDAGVIPRAVKQIFEILEAQNVEYNMKVTFLELYNEELTDLLAPEETSTFVDYKSKKPIALMEDGKGGVFVRGLEEEIVCTANEIYKILEKGSAKRHTVETLLNKQSSRSHSIFAITIHIKECTPEGEEMIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVDHSGHVPYRDSKLTRLLRDSLGGKTKTCIIATISPSIHCVEETLSTLDYAHRAKNIKNKPEINQKMTKSAMIKDLYSEIDRLKREVYAAREKNGIYIPRDRYLHEEAEKKAMAEKIEQMEQGTKSKDKQLMELQELYNSQQLLTAELSDKLEKTERSLQVTEQSLFDLEERHKQVNATIKEKEFLITNLLNSERALVERANELRAELENAASDVSNLFSKIERKDKIEEGNRLLIQKFQSQLAQQLEVLHKTVSASVMHQEQQLKDMEEDMQSFVSTKAEATKDLRVRVEKLKNMHGSGIKALDNLAEELKGNNQLTYEDLNSQVAKHSSALEDVFKGIALEADLLLSDLQSSLHNQEANLIAYAHQQRVAHARAIDTTRAVSKITVNFFETIDRHASSLTQIVEEAQFVNDQKLCELEKKFKECTAYEEKQLLEKVAEMLASSNSRKKKLVQMAVNDLRESAKSSTGKLRQEALTMQDSTSSVKEEWRDHMEKTESNYDEDTSAVESGKADLVKVLQICLNKAEVGSQQWKNAQESLLSLEKRNAASVDSIIRGGIEANQVLRARFSSAVSTTLEDADLANKDINSSIDYSLQLDHEACGNLNSTIVPCCGDLRELKGTHYHKIVEITENAGNCLLNEYMMVDEPSCSTPRKRPINLPSVSSLEELRTPSFEELLKSFWDAKSLKQGNGDVKHIGALEATQSVGQIK* 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0068 1039 Coils Coil 403 423 - -
Lan3g0068 1039 Coils Coil 475 502 - -
Lan3g0068 1039 ProSitePatterns Kinesin motor domain signature. 287 298 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lan3g0068 1039 Coils Coil 517 555 - -
Lan3g0068 1039 PANTHER KINESIN-LIKE PROTEIN KIF11 1 1034 - -
Lan3g0068 1039 Pfam Kinesin motor domain 51 387 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan3g0068 1039 MobiDBLite consensus disorder prediction 794 817 - -
Lan3g0068 1039 CDD KISc_BimC_Eg5 43 396 - -
Lan3g0068 1039 PANTHER KINESIN-LIKE PROTEIN KIN-5D 1 1034 - -
Lan3g0068 1039 Gene3D Kinesin motor domain 41 427 IPR036961 -
Lan3g0068 1039 PRINTS Kinesin heavy chain signature 122 143 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan3g0068 1039 PRINTS Kinesin heavy chain signature 254 271 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan3g0068 1039 PRINTS Kinesin heavy chain signature 288 306 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan3g0068 1039 PRINTS Kinesin heavy chain signature 337 358 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan3g0068 1039 ProSiteProfiles Kinesin motor domain profile. 45 387 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan3g0068 1039 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 427 IPR027417 -
Lan3g0068 1039 Coils Coil 595 615 - -
Lan3g0068 1039 MobiDBLite consensus disorder prediction 1 39 - -
Lan3g0068 1039 SMART kinesin_4 43 395 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan3g0068 1039 MobiDBLite consensus disorder prediction 794 813 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0068 Lan-Chr3 452134 458276 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0068 21 417 Miscellaneous Gene Families AT5G06670 36.139 2.50e-62 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0068 K10398 - gmx:100816693 1699.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0113 10 662903 669225 Lan3g0068 3 452134 458276 LSH
Lan3g0068 3 452134 458276 Lan8g1697 8 23836171 23842207 PCT
Lan8g1697 8 23836171 23842207 Lan3g0068 3 452134 458276 PCT