Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1368 ATGCAGTGGTGCACGTTGTATTGTATCTGTCATCAATCATATCACTTTTTTCATCTTCATTCACTTCCACTTATTATTTATTATAATTATTATTCAACACTAACCCAAACCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCCTTCATCATCAGATTTTGTTCCCATTGGTGCCTCCAAATTTGACATATCCAGCACTTGGGACTGGTCAGCTGAATTCAGAAATGGTTAAGAGAGATATTATCATGTTGCAGTGCATAGAGGGAATTTTGCATCTATTTGCTCCCATTTTGCGATGTTGCGACCTTGATTTAATTAAGCAGCCAACGGGCCTTGAAGATCCTGAAATTCTTGCAAGGGAAACAGTGTTCAGTGTAAGTGAAATCGAAGCACTTTATGAGCTCTTTAAAAAGATCAGCAGTGCTGTGATTGATGATGGGCTGATTAACAAGGAAGAGTTTCAATTGGCCTTATTCAAGACAAATAAAAAAGAGAGCTTATTTGCGGATCGGGTATTTGATTTGTTTGACACAAAGCACAATGGGATACTTGGTTTTGAAGAGTTTGCTCGTGCTCTCTCCGTCTTCCATCCAAATGCCCCTATTGATGATAAGATTGAATTTTCCTTTCAATTGTATGATCTCAAGCAGCAGGGTTTTATTGAAAGGCAAGAGGTGAAGCAAATGGTAGTGGCTACACTTGCTGAGTCTGGCATGAACCTATCGGATGATATAATAGAGAGTATAATTGACAAGACTTTCGAGGAAGCAGATACGAAACACGACGGCAGGATTGACAAGGAGGAGTGGAGAAGCCTTGTTTTGCGCCACCCTTCACTATTGAAGAACATGACCCTTCAATATCTCAAGGACATCACCACAACATTCCCAAGCTTTGTATTCCATTCACAAGTAGATGATACCTAA 942 0.3992 MQWCTLYCICHQSYHFFHLHSLPLIIYYNYYSTLTQTSLSLSLSLSLSFSLSLLHHQILFPLVPPNLTYPALGTGQLNSEMVKRDIIMLQCIEGILHLFAPILRCCDLDLIKQPTGLEDPEILARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIEFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDDIIESIIDKTFEEADTKHDGRIDKEEWRSLVLRHPSLLKNMTLQYLKDITTTFPSFVFHSQVDDT* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1368 313 PANTHER CALCINEURIN B-LIKE PROTEIN 3 ISOFORM X2 88 313 - -
Lan2g1368 313 SUPERFAMILY EF-hand 120 305 IPR011992 -
Lan2g1368 313 ProSiteProfiles EF-hand calcium-binding domain profile. 169 204 IPR002048 GO:0005509
Lan2g1368 313 ProSiteProfiles EF-hand calcium-binding domain profile. 206 241 IPR002048 GO:0005509
Lan2g1368 313 Pfam EF-hand domain pair 151 196 IPR002048 GO:0005509
Lan2g1368 313 PANTHER CALCINEURIN B 88 313 IPR045198 GO:0005509|GO:0019722|GO:0019900
Lan2g1368 313 Gene3D - 119 313 - -
Lan2g1368 313 Pfam EF-hand domain pair 209 275 IPR002048 GO:0005509
Lan2g1368 313 ProSiteProfiles EF-hand calcium-binding domain profile. 250 285 IPR002048 GO:0005509
Lan2g1368 313 SMART efh_1 254 282 IPR002048 GO:0005509
Lan2g1368 313 SMART efh_1 173 201 IPR002048 GO:0005509
Lan2g1368 313 SMART efh_1 210 238 IPR002048 GO:0005509
Lan2g1368 313 PRINTS Recoverin family signature 177 198 - -
Lan2g1368 313 PRINTS Recoverin family signature 224 242 - -
Lan2g1368 313 PRINTS Recoverin family signature 270 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1368 Lan-Chr2 24342135 24346671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1368 88 313 EF-hand Containing Proteins AT5G55990 89.823 3.94e-148 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1368 K06268 - zju:107416677 430.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1368 2 24342135 24346671 Lan2g1368 2 24342135 24346671 ECH