Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1353 ATGGCACTTGAATCATGGGTATTCGGTCACCAACTTCTCCTAACAGGTTATAGGTTACCTTACATTTCACATCCAAAGAGAATAATCCCAATCAAAGTTGCATTAGATACAAACAATGCATACCCATTTCCCTCACTCTCCAAAAGCTTTATCCTTTCTAGTTATAACAATACCAATGTATTTTGTGGAACTCGCTTGTTGAGGTGTTTAGGTACTAGCAGCACTAGCAGTATTGGTGATTCTTTGAATGGAACAAATTCTGTTTCCAAAGTGAATTTGAACTTTATACAGCAATTGCTGAACAGGGGAATCATTTTGGCTGCAATTGTTTGCGGGGTATTCGTTTTTGGATGTTGGCGAGCTCTTGCTGTTGAAGATGTTGCAAATGCTGGATATAGGGTTATTGATCAGAGCATACTTTTGCTTAAGAGCACTTGGCCTAAAGTGTTGCCGGTTCTTCGTATGTTCAAGGAGCATGGTTTAGTGCTGGCACTGCTTTTGAGTCTTTCAGCTTTTTTCTCCATGGCCGAGACTTCAATTACTACACTTTCGCCTTGGAAGGTTCGTGAGTTGGCTGAAAAGGAATCTGAAAATGGTGTCTTCAGACTACTCCGAAGTGATGTTACCCGATTCCTTACAACTATACTTATTGGCACAACTGTGGTCAATATTGGGGCAACTGCTTTGGTCACAGAAGCTGCAACTGCAATATTTGGCGAAGCTGGTGTTAGTGCTGCTACAGGAGTGATGACTGTTGCCATTTTACTTCTCACTGAAATCACTCCAAAAAGTATAGCAGTTCATAATGCCACAGAGGTAGCTCGGTTTGTGGTCAGGCCAGTGGCATGGCTTTCCGTGGTGTTGTATCCTGTTGGAAGAGTTGTTACTTATCTTTCAATGGGCATGCTTAAATTGCTTCGCTTAAAAGGAATAAGCGAACCTTATGTAACTGAAGATGAGCTAAAATTGATGTTAAGGTCTGCAGAATTAAGTGGGGCCATAGAGGAGGAAGAACAGGATATGATTGAAAATGTGTTGGAGATAAAAGACACACATGTGAGAGAGGTTATGACACCACTTGTTGATGTTGTTGCTATTGATGCAAGTTTAAGCCTTTTAGATTTTCATGACTTGTGGGTCACACATCAATACTCAAGGGTACCTGTTTTTGAGCAACGTGTCGATAACATAATGGGCATAGCATATGCAATGGAACTGCTAGATTATGCACAGAAGGGTGAGTTGCTAGAAAGTACTACTGTTGGAGATATGGCTCACAAGCCTGCATATTTTGTACCGGATTCAATGTCTGTTTGGAATCTTCTTAGAGAGTTTAGAATCAGGAAGGTTCACATGGCTGTTGTTCTTAATGAGTATGGTGGAACTGTGGGAATTGTAACTCTTGAGGATGTTGTTGAGGAAATTGTTGGTGAAATCTTTGATGAGAATGACTCAAAGGAGGAGATACAGAAAAAAACTGGCTACATTGTAATGCGAGCTCACGGTGTATTTGACGTCGATGCAAACACATCTATTGATCAGCTCTCTGAAGATTTGAACATCAAAATGCCAGAGGGTCACCAATATGAGACGGTATCAGGCTTTGTATGTGAAGCATTTGGATACATCCCAAGGACAGGAGAGTGCATCAAAGTGGTTCTCGAAAGGGAAGAGGAAGAGGAAGATGATGAGTCCAATGCTGTCCACCAGGATCAGAAGGAGAAGAACCACATTTTCAAAGTTGAGATACTAGCAGGAAATGCCAGAAAGGTTCGCGCTGTTCGGTTTGAAAGGATAAATGGTGATGATGAAATGGCACATTCTAAAGAAGTGACTCGCGTGTTCCCGAAAATCACGAAAAGAAAATGTAGCAGCGATGAGGATGATGCAGCAGAGTACGACGGAAATGCATTCGCAAAGAGAACACGGGATGACATGTGTAATGAATATGTAGATGATTTAGAAAATTGCAACACGGATTAA 1983 0.413 MALESWVFGHQLLLTGYRLPYISHPKRIIPIKVALDTNNAYPFPSLSKSFILSSYNNTNVFCGTRLLRCLGTSSTSSIGDSLNGTNSVSKVNLNFIQQLLNRGIILAAIVCGVFVFGCWRALAVEDVANAGYRVIDQSILLLKSTWPKVLPVLRMFKEHGLVLALLLSLSAFFSMAETSITTLSPWKVRELAEKESENGVFRLLRSDVTRFLTTILIGTTVVNIGATALVTEAATAIFGEAGVSAATGVMTVAILLLTEITPKSIAVHNATEVARFVVRPVAWLSVVLYPVGRVVTYLSMGMLKLLRLKGISEPYVTEDELKLMLRSAELSGAIEEEEQDMIENVLEIKDTHVREVMTPLVDVVAIDASLSLLDFHDLWVTHQYSRVPVFEQRVDNIMGIAYAMELLDYAQKGELLESTTVGDMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGIVTLEDVVEEIVGEIFDENDSKEEIQKKTGYIVMRAHGVFDVDANTSIDQLSEDLNIKMPEGHQYETVSGFVCEAFGYIPRTGECIKVVLEREEEEEDDESNAVHQDQKEKNHIFKVEILAGNARKVRAVRFERINGDDEMAHSKEVTRVFPKITKRKCSSDEDDAAEYDGNAFAKRTRDDMCNEYVDDLENCNTD* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1353 660 Pfam CBS domain 421 476 IPR000644 -
Lan2g1353 660 ProSiteProfiles CNNM transmembrane domain profile. 152 338 IPR002550 -
Lan2g1353 660 SMART CorC_HlyC_2 497 600 IPR005170 -
Lan2g1353 660 ProSiteProfiles CBS domain profile. 424 482 IPR000644 -
Lan2g1353 660 PANTHER HEMOLYSIN-RELATED 80 656 - -
Lan2g1353 660 Gene3D - 332 487 IPR046342 -
Lan2g1353 660 Gene3D - 494 597 IPR016169 -
Lan2g1353 660 SUPERFAMILY CBS-domain pair 340 479 IPR046342 -
Lan2g1353 660 Coils Coil 554 574 - -
Lan2g1353 660 PANTHER BNAC03G73630D PROTEIN 80 656 - -
Lan2g1353 660 Pfam Transporter associated domain 498 599 IPR005170 -
Lan2g1353 660 CDD CBS_pair_CorC_HlyC_assoc 352 473 IPR044751 -
Lan2g1353 660 Pfam Cyclin M transmembrane N-terminal domain 162 338 IPR002550 -
Lan2g1353 660 SUPERFAMILY FAD-binding/transporter-associated domain-like 495 603 IPR036318 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1353 Lan-Chr2 24239468 24246705 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1353 - - gmx:100778907 991.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1353 2 24239468 24246705 Lan2g1353 2 24239468 24246705 ECH
Lan2g1353 2 24239468 24246705 Lan9g1489 9 21543003 21549596 LSH