Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1332 ATGTTCTTCTATAATGCTTTGTTTCGTGTCTCTAGAACTATTTCCCGAACCTCCACGCTTCATTCTGCTTCCCACAGATCTCAACAATACTCTTCTACTTTTAACAATCACTTCCATTCTCTTCTTTCCCAATCACCCACTAAGTTGATTCCTTTTCAATTCAATTTGTCATCTACACTAAAAAGCTCATCCTTCACTTCAAGATTCGGGTTTTCTTCGCCAGCCTCTTCTGAAACTACTGAAAAGGAAAAACATAATAACGGGCATAATGGAGAATCTAGAAATGATGACCAAGCAAAAACAGGTGAAAAGGTGAAGAAAATCGATCAGGCTGGACAAGCTGTAGATCAAACCGAAGAATCGGGTTCTAATTCTGATTCTCAAACAGACAAAAGGAGAGGTTCTAAACGAACTGCCTTTTCTGATTCAGATTCAGATTCAGAGAGTGAAGATAATCTCTCCAGGGATGATTTAATTAAGCTTGTGACCGAGAAGGAAGAACTTTTGAAGTTGAAGCACAAAGAGATTGAGACAATGAAGGATAAAGTTTTGCGTACTTATGCAGAGATGGAGAATGTCATGGACAGAACTAGACGTGAAGCAGAGAACTCAAAAAAATTTGCTATCCAGAATTTTTCGAAGGGTTTACTCGATGTTGCGGACAATTTGGGAAGAGCTTCCTCTGTTGTAAAGGAAAGTTTTTCAAAAATTGAGTCACCAGATGGCTCTGCTGAAGTGGTAAAACTCCTGAAAACACTTCTAGAAGGTGTTGAAATGACTGAAAAACAACTTTCAGAGGTACTTAAAAAATTTGGCGTTGAAAAATATGATCCTATAAATGAGCCATTTGATCCACACAGGCATAATGCAGTCTTCCAAATCCCTGATGGTTCTAAGCCTCCAGGCACTGTTGCAGCCGTACTGAAGGTAGGATATATGCTATACGATCGCGTTATACGGCCAGCAGAAGTTGGTGTAACCCAAGCAGTGGAAGATAACAATGCAACAGAATGA 1014 0.3945 MFFYNALFRVSRTISRTSTLHSASHRSQQYSSTFNNHFHSLLSQSPTKLIPFQFNLSSTLKSSSFTSRFGFSSPASSETTEKEKHNNGHNGESRNDDQAKTGEKVKKIDQAGQAVDQTEESGSNSDSQTDKRRGSKRTAFSDSDSDSESEDNLSRDDLIKLVTEKEELLKLKHKEIETMKDKVLRTYAEMENVMDRTRREAENSKKFAIQNFSKGLLDVADNLGRASSVVKESFSKIESPDGSAEVVKLLKTLLEGVEMTEKQLSEVLKKFGVEKYDPINEPFDPHRHNAVFQIPDGSKPPGTVAAVLKVGYMLYDRVIRPAEVGVTQAVEDNNATE* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1332 337 MobiDBLite consensus disorder prediction 78 110 - -
Lan2g1332 337 MobiDBLite consensus disorder prediction 125 144 - -
Lan2g1332 337 Gene3D Head domain of nucleotide exchange factor GrpE 272 327 IPR009012 GO:0006457
Lan2g1332 337 ProSitePatterns grpE protein signature. 283 326 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Lan2g1332 337 PRINTS GrpE protein signature 184 200 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Lan2g1332 337 PRINTS GrpE protein signature 280 295 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Lan2g1332 337 PRINTS GrpE protein signature 307 326 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Lan2g1332 337 MobiDBLite consensus disorder prediction 66 153 - -
Lan2g1332 337 Gene3D - 159 271 IPR013805 -
Lan2g1332 337 SUPERFAMILY Head domain of nucleotide exchange factor GrpE 273 328 IPR009012 GO:0006457
Lan2g1332 337 PANTHER GRPE PROTEIN HOMOLOG 9 104 - -
Lan2g1332 337 PANTHER GRPE PROTEIN HOMOLOG 113 330 - -
Lan2g1332 337 CDD GrpE 177 326 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Lan2g1332 337 Coils Coil 180 200 - -
Lan2g1332 337 SUPERFAMILY Coiled-coil domain of nucleotide exchange factor GrpE 164 272 IPR013805 -
Lan2g1332 337 Pfam GrpE 162 327 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Lan2g1332 337 PANTHER GRPE PROTEIN 113 330 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Lan2g1332 337 PANTHER GRPE PROTEIN 9 104 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Lan2g1332 337 Hamap Protein GrpE [grpE]. 96 328 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1332 Lan-Chr2 24096133 24099048 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1332 K03687 - gmx:100803396 401.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1332 2 24096133 24099048 Lan2g1332 2 24096133 24099048 ECH