Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1301 ATGGAACTGAAGTTGGTTGTGATATTATTACTCTGTGCAACTGTAACAGCAAAATATGTTCGCCCTATGCCTCGAAAACCATTACAAATCTCATCATGGCTTCCATTTTCAAAGCCACACTCCAATCACCCTCATCAGGTACATATTTCTCTGGCAGGAAACAAGCACATGAGAGTTACCTGGATAACCGATGATAAAAGCTCACCTTCATATGTAGAATATGGCACATCACCTGGTAGATACGACACCGTAGCTGAAGGAGAGTACACCTCTTATAGTTATATGTTATATAGCTCAGGAAAGATACACCATACTGTAATTGGTCCTCTGGAACACAATACTACGTACTTTTACCGATGTGGTGGATATGGTCCTGAGTTCCAACTTAAAACTCCTCCAGCTCAATTTCCAGTTACTTTTGCTGTGGCTGGGGATCTTGGTCAAACTGGTTGGACTAAATCAACATTAGATCACATTGACCAATGTAACTATGATGTTTACTTGCTTCCAGGAGATCTTTCATATGCCGATCGAATGCAACATCTATGGGACACATTTGGTGAGCTAGTTGAGCCACTTGCTAGTACAAGGCCATGGATGGTAACACAGGGGAACCATGAAAAGGAGAACATACTTTTGTTAGAGGATAGGTTTGTGTCCTATAATTCCAGATGGAAAATGCCATTTGAGGAAAGTGGATCAACTTCAAATCTCTATTATTCTTTTGAAGTTGCAGGCGTTCACATCATCATGCTTGGTTCCTATGCCGATTATGATGAGTATTCAGAACAATACAGATGGCTAAAGGCAGATTTGTCAAAGGTGGACCGGGAAAGGACACCTTGGCTGCTTGTGTTATTTCATGCACCATGGTATAATAGTAACAGGGCTCATCAAGGTGAAGGGGATGATATGATGGCTGCTATGGAGCCATTGCTTTATGCTGCCGGTGTTGATATAGTTCTAGCTGGTCATGTTCATGCTTATGAACGTTCGAAACGTGTTTATAATGGAAGATTGGATCCCTGTGGTGCTGTCCATATAACTATTGGCGATGGAGGAAACAGAGAAGGTTTAGCCCATAGGTATATAAACCCACAGCCAAAGTGGTCTGAATTCCGTGAAGATAGTTTTGGACATGGTGAGTTAAAGATTGTAAACTCCACTCATGCCTTCTGGAGTTGGCACAGGAATGATGATGATGAGGCGGTAAAAGTTGATGATATCTGGATAACCTCTTTGGTCAGCTCAAGATGTGTTGATAAAAAGAGACTTAAACTGATGAACATACTTACAAACCCTAAAAGCCTTCATTTATCAACTGGTGGAATAGCAAGTGTTTGA 1344 0.4122 MELKLVVILLLCATVTAKYVRPMPRKPLQISSWLPFSKPHSNHPHQVHISLAGNKHMRVTWITDDKSSPSYVEYGTSPGRYDTVAEGEYTSYSYMLYSSGKIHHTVIGPLEHNTTYFYRCGGYGPEFQLKTPPAQFPVTFAVAGDLGQTGWTKSTLDHIDQCNYDVYLLPGDLSYADRMQHLWDTFGELVEPLASTRPWMVTQGNHEKENILLLEDRFVSYNSRWKMPFEESGSTSNLYYSFEVAGVHIIMLGSYADYDEYSEQYRWLKADLSKVDRERTPWLLVLFHAPWYNSNRAHQGEGDDMMAAMEPLLYAAGVDIVLAGHVHAYERSKRVYNGRLDPCGAVHITIGDGGNREGLAHRYINPQPKWSEFREDSFGHGELKIVNSTHAFWSWHRNDDDEAVKVDDIWITSLVSSRCVDKKRLKLMNILTNPKSLHLSTGGIASV* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1301 447 PANTHER ACID PHOSPHATASE RELATED 3 425 IPR039331 GO:0003993
Lan2g1301 447 Gene3D - 43 134 - -
Lan2g1301 447 Pfam Calcineurin-like phosphoesterase 139 329 IPR004843 GO:0016787
Lan2g1301 447 Pfam Purple acid Phosphatase, N-terminal domain 44 124 IPR015914 GO:0003993|GO:0046872
Lan2g1301 447 SUPERFAMILY Metallo-dependent phosphatases 137 402 IPR029052 -
Lan2g1301 447 SUPERFAMILY Purple acid phosphatase, N-terminal domain 32 133 IPR008963 GO:0003993|GO:0046872
Lan2g1301 447 CDD MPP_PAPs 135 413 IPR041792 -
Lan2g1301 447 Pfam Iron/zinc purple acid phosphatase-like protein C 345 402 IPR025733 -
Lan2g1301 447 Gene3D - 135 422 IPR029052 -
Lan2g1301 447 PANTHER PURPLE ACID PHOSPHATASE 3 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1301 Lan-Chr2 23896185 23901986 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1301 22 424 Miscellaneous Gene Families AT2G03450 26.931 1.91e-29 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1301 K22390 - gmx:100790529 773.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1301 2 23896185 23901986 Lan2g1301 2 23896185 23901986 ECH
Lan2g1301 2 23896185 23901986 Lan2g1301 2 23896185 23901986 PCT