Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1290 ATGGCAGTGAGCCATGATATGCTTAGTCTTCTGTCAGATCCATTGCTTGTTATTATCATTTCCTTGCTTCCCTTCAATGAAGCTGTTAGAACTTCTGTATTTTCCAAAAGTTGGTGCAACAACAAGTTGTTCAAATTAACAACAAACATAGAGTTCAATGAACTCTTTTTTGTTAAATCTTCTAACCCTTCTATTAAAGATCTACAAAGAAAGGCTTTTCTAGACTTCATAACGTTTTGGATTGATAATAACAAAGAAACTATCATTGAGAAGTTTTCTTTGAAGTTATCAATGCCTAAGAATGTTAGTGAACTCACAGAAAAATGCATTGCTTTTGCTACACATAGGGGTGGGGTAAAACAACTGGAGCTTGATTTTTCTGATCCGAATTGGGTTGAATACAATAACGTTGCACCATATCATAAATTTGATGAGCCAATGTTTGAATTGCCTGAACATGTTTATGAGGTTAGAGGTATTCAAACATTGAAGCTATATTCATGTCGTTTTGTTGAGAAAGATTTGTTAAAGTTTCATGCACTCAAAGAAGTTTCTTTTGGGTGGATTGAAGTATCAATCTTTCTTATCAACACTTTGCTTTCAAACTGCAAATTGCTTGAAAGTTTGAGTCTGAAGAGGTGCTGGAATTTCAGTGAGTTTTATGTAAGGGATAAAAATCAAAAGCTAAAGAAGTTGGTGGTTGATAAGTGTTCTTTTCAATATGAACTTTTCAGAGTGGTGGCACCAAATCTGAAGTTTTTGAAATATAGTGGAATGATGAACTATTTTGACATACAAATGTGTCCACAAGTGGTAGAAGCAGATCTTGATTTCTCTACAGAATTTGGATTTGGTGGAAATGGTTATCGTCTTTACAATCTCATGGAAGATCTCTATTCACTCAAAGTTTTAACTGTATGTAGCTACTTCCTCCAGGTTATTCCAACTGGAGGCGAACTACTACGTATGGAACGTAACTTCAACGTAAGACATTTGACAATAAAGACAGAAATGAACAAGAATGAGTATAAAGGAATTGTATTCATGCTCAGAAGCTGCCCTATGTTAGAACGCCTCACCATTGAACTAGGCTGTGCAAGAATTTGGCCAAATCATGTGCAACCATTTGCTTTTTCACCAAAGAATTTCTGGACAGAGAATGTAAGAATCTATGAATGCTTGAAATCAAGCCTAGAGGTTGTGGAGGTAAAGGGCTTCAAAGGCTTTGATAAGAATGAGATTCGCATGTTGGCATATTTCATTCATTGTGGAAAAGTATTGAAGAAAATGACTATCAATATAGAAAAGAATATTACTCTAGTCTGCAATAAGAATTCTGATCTGAATCCACATAGATTTGCAGAGTTCTTATTGAGAGTTCCAAGAGCTTCTAGTGATTTGGAGATAACTATTTGTTAA 1419 0.3488 MAVSHDMLSLLSDPLLVIIISLLPFNEAVRTSVFSKSWCNNKLFKLTTNIEFNELFFVKSSNPSIKDLQRKAFLDFITFWIDNNKETIIEKFSLKLSMPKNVSELTEKCIAFATHRGGVKQLELDFSDPNWVEYNNVAPYHKFDEPMFELPEHVYEVRGIQTLKLYSCRFVEKDLLKFHALKEVSFGWIEVSIFLINTLLSNCKLLESLSLKRCWNFSEFYVRDKNQKLKKLVVDKCSFQYELFRVVAPNLKFLKYSGMMNYFDIQMCPQVVEADLDFSTEFGFGGNGYRLYNLMEDLYSLKVLTVCSYFLQVIPTGGELLRMERNFNVRHLTIKTEMNKNEYKGIVFMLRSCPMLERLTIELGCARIWPNHVQPFAFSPKNFWTENVRIYECLKSSLEVVEVKGFKGFDKNEIRMLAYFIHCGKVLKKMTINIEKNITLVCNKNSDLNPHRFAEFLLRVPRASSDLEITIC* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1290 472 Gene3D Ribonuclease Inhibitor 90 440 IPR032675 -
Lan2g1290 472 Pfam FBD 392 432 IPR006566 -
Lan2g1290 472 PANTHER F-BOX/RNI/FBD-LIKE DOMAIN PROTEIN 3 421 - -
Lan2g1290 472 SMART 9598neu4hmm 392 472 IPR006566 -
Lan2g1290 472 PANTHER F-BOX PROTEIN-LIKE 3 421 - -
Lan2g1290 472 SUPERFAMILY RNI-like 150 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1290 Lan-Chr2 23836165 23838968 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g1290 1 362 EF-hand Containing Proteins AT5G41840 23.737 1.86e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1290 - - lang:109341958 962.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1290 2 23836165 23838968 Lan2g1290 2 23836165 23838968 ECH