Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1163 ATGACTAATGTGGTGGAAGTGAAGGTTGGTTTGCACTGTGACGTGTGTATCAAGAAAATTCTCAAAGCCATCAAGAAGATTGAAGATATTGAAACGTATAACGTGGATAAAGAGCTTAATAAGGTGATAGTTACAGGCAACGTCACAACAGAAGAAGTGATTAAAGTCCTTCAAAAGAATGGGAAGAATGCAACACCTTGGGAAGATGTTCTTCAACCTCAACTCAATTGCTGA 234 0.3846 MTNVVEVKVGLHCDVCIKKILKAIKKIEDIETYNVDKELNKVIVTGNVTTEEVIKVLQKNGKNATPWEDVLQPQLNC* 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1163 77 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 2 70 - -
Lan2g1163 77 Pfam Heavy-metal-associated domain 7 62 IPR006121 GO:0046872
Lan2g1163 77 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 2 70 IPR045181 GO:0046872
Lan2g1163 77 SUPERFAMILY HMA, heavy metal-associated domain 3 68 IPR036163 GO:0046872
Lan2g1163 77 Gene3D - 2 66 - -
Lan2g1163 77 ProSiteProfiles Heavy-metal-associated domain profile. 10 66 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1163 Lan-Chr2 22850147 22851016 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1163 - - adu:107496942 136.346
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1163 2 22850147 22851016 Lan9g1355 9 20671740 20672844 LSH
Lan14g0170 14 2090247 2091073 Lan2g1163 2 22850147 22851016 PCT
Lan2g1163 2 22850147 22851016 Lan14g0170 14 2090247 2091073 PCT