Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1156 ATGGCAACCAAAGTTCAAAACTTTTTCAAAGATAGAAAATACCCATTCATTTTCACTCTCCTACTTTTGCTTATTTGCGTCACGCTCCTCCTCTTCACTGACACCACCACCATCTCCAACTTCAACTTCAACCCCTTTTATTTCTACTCTGATTCAAGTGCCAAAAACAAAGAGCAACCACTCCTTAACCAATACATCACAGTCCCAAAGGATAGTAATGTTAATATAGAGTGGAAGCTTTGTAAGGGTGGTCTATTGGTAGTTGATTATATACCTTGTTTGGATAATTTTGAAGCCATTAAGGCTCTCAAGTCAAGGAAGCACATGGAACACAGAGAAAGGCATTGTCCTAATGTTAGTGTTCAATGTTTGCTGCCCCTTCCCAAAGGGTATAAAGTCCCCGTTCCGTGGCCTAAGAGCAGGGACATGATTTGGTATAATAATGTCCCTCATGCAAAACTAGTTGAGTACAAGAAGGATCAACGCTGGGTGGAGAAGTATGGCGAATATCTTGTCTTTCCAGGAGGTGGTACTCAATTCAAGGGTGGAGCTGATCATTACATTGATTTCATAGAGAAGACATTACCGGCAATTCAATGGGGAAAACATGTCAGAGTTGTTCTAGATGTTGGATGTGGTGTTGCTAGCTTTGGTGGCTATCTGTTGGACAAAAATGTTATTACTATGTCCTTTGCTCCTAAGGATGAACATGAAGCTCAGATACAATTTGCTTTGGAGCGCGGAATTCCTGCAACTCTTTCCGTTATTGGAACACAAAGGTTGAGTTTTCCTGACAATGGGTTTGATTTGATCCATTGTGCACGATGCAGGGTTCATTGGGATGCAGATGGTGGGAAACCATTATATGAGCTCAATAGGATTCTTAGACCTGGCGGTTTCTTTGTATGGTCTGCAACACCGGTTTATCGTAATAATGAAAGGGATCAGCAAGCATGGAATGCCACCACAGCCATAACAAAAGCTATGTGCTGGACGGTTGTCACTAAGGCACGTGATCCATCGGGACATGGGCTCGTTATATACCAGAAGCCAACCTCATCTTCCTGCTATGAGAAACTTGAAGTGAAAAACCGACCTTTATGCAAAAATGAGGGTGGAAAAAATAGTTCATGGTATGCCATACTCAATAGTTGCCTTACTCCTCTTCCAGTTGATGGTGCGGGTAACGTGCAGAACTGGCCCATGCCTTGGCCCCAAAGGCTTACCAATAAGCCTCCTGGTTTATCTACTGATTCAGACGCAGATGATAAGTTCGACAAGGACAGCAAACACTGGTCTAAACTAGTTTCAGATGTTTATGTGAACAGTCTTTCCATAAACTGGTCAAGTGTTCGAAATGTAATGGACATGAATGCCGGTTATGCAGGATTTGCCGCAGCACTCAATGATCTACCAGTCTGGGTGATGAATGTAGTACCGATAGATGCGCCAGATACTCTTTCTATTATATATGACAGAGGGTTAATAGGAATGTATCATGATTGGTGCGAGTCCTTTAATACATATCCTCGCACATATGATGTCCTCCATTCCAGCTTTCTCTTCAAATATCTTGAGCGAAGATGTGACATCGTAGACGTGGTTGTGGAGATGGATCGTATACTGAGACCAGATGGATATCTCCTGGTTCAAGACTCTATGGACATACTTAACAAGCTCAGTCCAATCTTGCGTTCACTTAATTGGTCTGTAACAATGCATCTAAATCAGTTTCTTGTTGGTCGGAAGAGTTTCTGGCGTCCCACGGTTGTTGAAACTGAATGA 1785 0.4246 MATKVQNFFKDRKYPFIFTLLLLLICVTLLLFTDTTTISNFNFNPFYFYSDSSAKNKEQPLLNQYITVPKDSNVNIEWKLCKGGLLVVDYIPCLDNFEAIKALKSRKHMEHRERHCPNVSVQCLLPLPKGYKVPVPWPKSRDMIWYNNVPHAKLVEYKKDQRWVEKYGEYLVFPGGGTQFKGGADHYIDFIEKTLPAIQWGKHVRVVLDVGCGVASFGGYLLDKNVITMSFAPKDEHEAQIQFALERGIPATLSVIGTQRLSFPDNGFDLIHCARCRVHWDADGGKPLYELNRILRPGGFFVWSATPVYRNNERDQQAWNATTAITKAMCWTVVTKARDPSGHGLVIYQKPTSSSCYEKLEVKNRPLCKNEGGKNSSWYAILNSCLTPLPVDGAGNVQNWPMPWPQRLTNKPPGLSTDSDADDKFDKDSKHWSKLVSDVYVNSLSINWSSVRNVMDMNAGYAGFAAALNDLPVWVMNVVPIDAPDTLSIIYDRGLIGMYHDWCESFNTYPRTYDVLHSSFLFKYLERRCDIVDVVVEMDRILRPDGYLLVQDSMDILNKLSPILRSLNWSVTMHLNQFLVGRKSFWRPTVVETE* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1156 594 PANTHER PMT16, PUTATIVE-RELATED 4 589 - -
Lan2g1156 594 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 4 589 IPR004159 GO:0008168
Lan2g1156 594 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 423 559 IPR029063 -
Lan2g1156 594 CDD AdoMet_MTases 207 302 - -
Lan2g1156 594 Gene3D Vaccinia Virus protein VP39 159 363 IPR029063 -
Lan2g1156 594 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 89 576 IPR004159 GO:0008168
Lan2g1156 594 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 312 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1156 Lan-Chr2 22811280 22815412 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1156 - - gmx:100800390 946.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g0975 3 21452904 21457324 Lan2g1156 2 22811280 22815412 PCT
Lan2g1156 2 22811280 22815412 Lan3g0975 3 21452904 21457324 PCT