Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0872 ATGCAAATGGATTCGTCTTCCGACGAAGAAGACGACCGCCACATCCTCATTCAGCAGAACGAGAGAACAAAGCCTCGTACTCCTCCCTCCACCACCACCGCCGCCGACACTTTCCACGTCGAAGGTTACACCTCGCAATCCCCGCGCTTCAATTGCAAGCTTCAGAAGAGGTACATTATCGCAATCATTGCTCTCTTCTTTGTCCTCCTCTTCTTCCTCTTGCTCCTCGTCGATCCTCGCCGCACCAACCTCACCTCATTTAGATTCGATTCCCTCACCGATCGAATGAAGGAATCCGAATTGCGTGCCATTTACCTCTTGCGCCAACAGCAGTTAAACCTCTTAACCGTTTGGAATCGCACTTTTCAATCCAACGCTTCCAATTCGAATCTGGAGGATCTGAAATCCGCAATGTTTAAGCAGATTTCTGTGAACAGAGAGATTCAGCAGGTTTTGTTGAATGCTCATAAGACAGGGAACACGGTTGAGCCTGAATTTGATTCTGGAAACACTAATTTGGGTGATGATATCAGTTTTGATAGGTGTAGAACAGTGAATCAAAGCTTGACACAGAGAAGAACCATTGAATGGAACCCTAAAAATGATAAATTTTTGCTTGCTATATGTGTTTCAGGACAAATGTCAAACCATTTGATTTGCTTGGAAAAACACATGTTTTTTGCTGCTGTTCTTAATAGGGTTTTGGTTATTCCTAGTTCTAAAGTGGATTACCTGTATGATAGAGTTATTGATATTGATCACATTAATAAATGTTTGGGAACAAAGGTGGTGATTTCCTTTGAAGAGTTTTTGGATATTAAGAAGGATCATTTACACATTGATAAGTTCCTGTGTTATTTCTCACTGCCTAAACCTTGTTATCTGGATGACGAGCGCCTGAAGAAGTTGAGTTCTTTGGGTTTATCAATGAGTAAACCTCAGCCTGTTTGGGAGGAGGATATTCGGAAGCCGAAAGCGAAGACGGTTCAAGATGTTCTGTCTAAGTTTACTTATGATGATGATGTTATGGCAATTGGGGATGTTTTCTATGCTAAAGTGGAGCATGAATGGGTGATGCAACCAGGTGGGCCAATTGCTCACAAATGCAAGACTCTGATTGAACCTAGTCGCCTTATTTTGCTTACTGCTCAGCGTTTTATTCAGACATTCCTGGGAAGGAAATTCATTGCTTTGCATTTTAGAAGACACGGATTTTTGAAATTCTGTAATGCTAAAAAACCAAGTTGCTTTTACCCCATTCCTCAAGCTGCAGATTGCATCTTGAGGGTGATTGAGAGGGCTGATGCGCCTGTTATTTATCTTTCAACTGATGCAGCAGAAAGTGAAACTGGTCTGCTTCAGTCACTAGTTGTTCTGAATGGCAGGCCTGTTCCACTTGTAGTACGCCCAGCTCGTAACTCAGCAGAAAAATGGGATGCTTTGTTGTACAGGCATGGTATTGAGGGAGACTCACAGGTTGAAGCTATGTTGGACAAGACTATATGTGCCATGTCTAGTGTGTTCATCGGCGCCTCCGGTTCTACTTTCACCGAAGACATCCTCCGTCTGAGAAAGGACTGGGGATCAGCATCCTTGTGTGATGAGTACCTTTGCCAAGGTGAAGAACCAAATGTAATAGCGGAGAATGAATAA 1653 0.4301 MQMDSSSDEEDDRHILIQQNERTKPRTPPSTTTAADTFHVEGYTSQSPRFNCKLQKRYIIAIIALFFVLLFFLLLLVDPRRTNLTSFRFDSLTDRMKESELRAIYLLRQQQLNLLTVWNRTFQSNASNSNLEDLKSAMFKQISVNREIQQVLLNAHKTGNTVEPEFDSGNTNLGDDISFDRCRTVNQSLTQRRTIEWNPKNDKFLLAICVSGQMSNHLICLEKHMFFAAVLNRVLVIPSSKVDYLYDRVIDIDHINKCLGTKVVISFEEFLDIKKDHLHIDKFLCYFSLPKPCYLDDERLKKLSSLGLSMSKPQPVWEEDIRKPKAKTVQDVLSKFTYDDDVMAIGDVFYAKVEHEWVMQPGGPIAHKCKTLIEPSRLILLTAQRFIQTFLGRKFIALHFRRHGFLKFCNAKKPSCFYPIPQAADCILRVIERADAPVIYLSTDAAESETGLLQSLVVLNGRPVPLVVRPARNSAEKWDALLYRHGIEGDSQVEAMLDKTICAMSSVFIGASGSTFTEDILRLRKDWGSASLCDEYLCQGEEPNVIAENE* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0872 550 MobiDBLite consensus disorder prediction 1 20 - -
Lan2g0872 550 Pfam GDP-fucose protein O-fucosyltransferase 225 524 IPR019378 -
Lan2g0872 550 Gene3D - 369 534 - -
Lan2g0872 550 PANTHER - 4 550 - -
Lan2g0872 550 MobiDBLite consensus disorder prediction 1 33 - -
Lan2g0872 550 CDD O-FucT_like 366 524 - -
Lan2g0872 550 PANTHER GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 2 4 550 IPR045130 GO:0036066|GO:0046922
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0872 Lan-Chr2 19106241 19109197 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0872 K03691 - gmx:100776069 827.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0591 11 4695373 4698614 Lan2g0872 2 19106241 19109197 LSH
Lan4g0823 4 10220689 10224560 Lan2g0872 2 19106241 19109197 PCT
Lan2g0872 2 19106241 19109197 Lan4g0823 4 10220689 10224560 PCT