Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0320 ATGTCCCTTACAAAAGAAATCATGGGTTCTTCATTGAAAATACAAGGATTTCTTCCACACAAGAATCAAGGCCATTTTCTTGGGAACCCTGTCCCTATATTTTTGTCTCCTATGCAAAACAGAAGAGATTTAAGGTTAAGAAAAAGTGTGAAGTTTCCTGTGGCAGCTATAAGTGAGGATTTGATTAAGGCATATGTGAAACAACATGCAGAGAAACCAATTCAGTTCAAGGTTAGAGCTGTAATAACTGTTAAGAACAGGAGCAAACAAGATATTAAAGACACCATTGTTAAGCATTTTGATTCCATCACTGATAAGATTGGAAGAAATGTTGTGTTGCAACTTATCAGCACTGAAATTGATCCAAAAACAAAAGCTCCAAAGAAGAGCAATGAGTCAGTGGTGAAGGATTGGTCTAAGAAATCAAAAGTTAGAGCAGAAAGAACACATTACACAGCTGAATTCATAGTGGACTCAAATTTTGGGGTACCAGGAGCAATTACTGTAACAAATAAACACCAAAGAGAGTTCTTTATAGAAAGTATAGCCATTGAAGGGTTTGCAAGTGGAGTAGTACATTTCCCTTGTAATTCATGGGTACAACCCACAACAAAGGATCATCATGGAAATAGGATATTCTTTTCTAACAAGCCATATTTACCTGGAGAAACACCTGCTGGGCTTAAATTATTAAGGGAAAAGGAGCTGAAAAATCTTAGAGGTGATGGAGAAGGAGTTAGATTATTATCTGATAGAATATATGATTTTGATACATACAATGATCTTGGAAATCCTGATAATGGAGTTGACTTTGTTAGACCAACTTTGGGTGAATCTCAAAATTATCCATATCCAAAACGATGTCGTACTGGTCGAGCCTCAACTGATACAGATATAGATGCAGAGAGTGTTGTGGACAATCCAAGGCTTGTGTATGTACCAAGAGATGAACAATTTCATGAATCTAAGATGGAAACATTTTTTGCCAAGAGGGTTGATGCAGTGCTCCATACCATGATCCCTAGCATTAAGGCTACTCTTTCTGCTAATAGCCAAGACTTCAATGATTTCTCAGATGTTGATAATCTCTATAATGAAAAGTGTCTCAATAAATTGGGTTTCAGTGATGAAATGTTGAAGAAATTACCACAAGTTGTTGCCAAGATACAAGAACACAGCAAGGGAATTCTTAAGTTTGATACTCCCAAGATTATTGCCAAGGATAAATATGCATGGCTGAGAGATGAAGAATTTGCTAGGCAAGTAATAGCAGGAGTAAACCCTGTTAATATTGAGAGGCTTCAAGTTTTCCCACCTTTGAGCAAGCTTGACCCTGAAATTTATGGCCCTCGGGAATCTGCCCTTAAAGAAGAGCACATTTTAGGACAACTTAATGGCATGACTGTGCAACAGGCAATAGAGGAAAATAAGTTGTTTATGATAGATTATCATGATGTATATCTTCCCTTTCTTGATAAGATCAATGCTCTTGATGATAGAAAATCATATGCTACACGCACCATTTTTTTCTTGACACCCTTAGGCACTCTCAAACCTATTGCTATAGAACTTAGCCTTGCTCATGGTGGACCAAGTTCAAGATCAAAACAAGTAGTTACTCCTCCTATGGATGCAACTGCTACTTGGATATGGCAACTTGCTAAGGCTCATGTTTGTGCCAATGATGCTGGAGTGCACCAACTTGTTAATCATTGGTTGAGGACTCATGCATGCATGGAACCATTTATACTGTCAGCACATAGACAATTAAGTGCAATGCATCCAATTTTCAAGTTGTTGGATCCACACATGAGGTACAACTTGGACATCAATGCTATAGCTCGCCAGAGACTCATCAATGCTGGTGGAATCATTGAGTCAAGCTTCACTCCTGGCCGCTATTGCATGGAGATTAGTTCTGCTGCTTACAAAAACTCGTGGCGCTTTGACAAGGAAGGCCTACCCGCTGATCTCATACACAGGGGAATAGCTGTACCTGACTCAACACAACCAAATGGTCTAAAGCTTCTAATAGAAGATTACCCATATGCAAAAGATGGGCTTTTAATCTGGTCAGCAATTGAGAATTGGGTCCGCACCTATGTGAACTACTACTACCATCATCCAAGCATGATTTGCAATGATAAAGAGTTACAAAGATGGTACTCCGAGTCGATCAATGTGGGCCATGCAGATCTCAGACACGAGACCTGGTGGCCCACATTGAACAATGGTGAGGATCTTGTCAATATCCTCACCACCTTGATTTGGATATCATCAGCACAACATGCAGCTCTTAACTTCGGGCAGTACCCTTATGGAGGTTATGTACCAAATCGTCCCCCGTTAATGAGAAGACTAATCCCACAAGAGGGTGATCCAGAATATGCAAATTTCCTAGATGATCCACAAAAGTATTTCCTAAATGCATTGCCTAGTTTGCTACAAGCTACAAAATATATGGCTGTGGTTGACACATTATCTACTCACTCACCAGATGAGGAGTACTTGGGAGAAAGGAATCAGCCATCTATTTGGTCAGGTGATGCACAAATCATTGATGCATTCTATCAATTCTCAGCAGAGATTGGAAGAATAGAGAAAGAGATTGAGAAAAGAAACCATGATGCAACACTAAGGAACCGATGTGGCGCAGGAGTAATACCTTATGAGTTACTTGCGCCTAGCTCCGGGCCCGGTGTTACATGTAGAGGAATTCCTAATAGTGTCTCCACATAA 2739 0.3969 MSLTKEIMGSSLKIQGFLPHKNQGHFLGNPVPIFLSPMQNRRDLRLRKSVKFPVAAISEDLIKAYVKQHAEKPIQFKVRAVITVKNRSKQDIKDTIVKHFDSITDKIGRNVVLQLISTEIDPKTKAPKKSNESVVKDWSKKSKVRAERTHYTAEFIVDSNFGVPGAITVTNKHQREFFIESIAIEGFASGVVHFPCNSWVQPTTKDHHGNRIFFSNKPYLPGETPAGLKLLREKELKNLRGDGEGVRLLSDRIYDFDTYNDLGNPDNGVDFVRPTLGESQNYPYPKRCRTGRASTDTDIDAESVVDNPRLVYVPRDEQFHESKMETFFAKRVDAVLHTMIPSIKATLSANSQDFNDFSDVDNLYNEKCLNKLGFSDEMLKKLPQVVAKIQEHSKGILKFDTPKIIAKDKYAWLRDEEFARQVIAGVNPVNIERLQVFPPLSKLDPEIYGPRESALKEEHILGQLNGMTVQQAIEENKLFMIDYHDVYLPFLDKINALDDRKSYATRTIFFLTPLGTLKPIAIELSLAHGGPSSRSKQVVTPPMDATATWIWQLAKAHVCANDAGVHQLVNHWLRTHACMEPFILSAHRQLSAMHPIFKLLDPHMRYNLDINAIARQRLINAGGIIESSFTPGRYCMEISSAAYKNSWRFDKEGLPADLIHRGIAVPDSTQPNGLKLLIEDYPYAKDGLLIWSAIENWVRTYVNYYYHHPSMICNDKELQRWYSESINVGHADLRHETWWPTLNNGEDLVNILTTLIWISSAQHAALNFGQYPYGGYVPNRPPLMRRLIPQEGDPEYANFLDDPQKYFLNALPSLLQATKYMAVVDTLSTHSPDEEYLGERNQPSIWSGDAQIIDAFYQFSAEIGRIEKEIEKRNHDATLRNRCGAGVIPYELLAPSSGPGVTCRGIPNSVST* 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0320 912 ProSiteProfiles PLAT domain profile. 92 214 IPR001024 GO:0005515
Lan2g0320 912 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 218 912 IPR013819 GO:0016702|GO:0046872
Lan2g0320 912 PANTHER LIPOXYGENASE 3, CHLOROPLASTIC 38 911 - -
Lan2g0320 912 PRINTS Plant lipoxygenase signature 184 202 IPR001246 GO:0016491
Lan2g0320 912 PRINTS Plant lipoxygenase signature 211 232 IPR001246 GO:0016491
Lan2g0320 912 PRINTS Plant lipoxygenase signature 250 266 IPR001246 GO:0016491
Lan2g0320 912 PRINTS Plant lipoxygenase signature 283 302 IPR001246 GO:0016491
Lan2g0320 912 PRINTS Plant lipoxygenase signature 351 372 IPR001246 GO:0016491
Lan2g0320 912 PRINTS Plant lipoxygenase signature 397 413 IPR001246 GO:0016491
Lan2g0320 912 PRINTS Plant lipoxygenase signature 436 455 IPR001246 GO:0016491
Lan2g0320 912 PRINTS Plant lipoxygenase signature 503 527 IPR001246 GO:0016491
Lan2g0320 912 PRINTS Plant lipoxygenase signature 824 838 IPR001246 GO:0016491
Lan2g0320 912 Pfam Lipoxygenase 227 895 IPR013819 GO:0016702|GO:0046872
Lan2g0320 912 CDD PLAT_LH2 76 216 IPR042057 -
Lan2g0320 912 Gene3D - 323 409 IPR027433 -
Lan2g0320 912 Gene3D - 545 911 - -
Lan2g0320 912 Gene3D - 410 543 - -
Lan2g0320 912 ProSitePatterns Lipoxygenases iron-binding region signature 2. 593 603 IPR020834 GO:0016702|GO:0046872
Lan2g0320 912 PANTHER LIPOXYGENASE 38 911 IPR000907 GO:0016702|GO:0046872
Lan2g0320 912 SUPERFAMILY Lipoxigenase 221 911 IPR036226 -
Lan2g0320 912 SMART LH2_4 76 216 IPR001024 GO:0005515
Lan2g0320 912 Gene3D PLAT/LH2 domain 61 219 - -
Lan2g0320 912 ProSitePatterns Lipoxygenases iron-binding region signature 1. 566 580 IPR020833 GO:0016702|GO:0046872
Lan2g0320 912 PRINTS Lipoxygenase signature 548 565 IPR013819 GO:0016702|GO:0046872
Lan2g0320 912 PRINTS Lipoxygenase signature 566 583 IPR013819 GO:0016702|GO:0046872
Lan2g0320 912 PRINTS Lipoxygenase signature 586 606 IPR013819 GO:0016702|GO:0046872
Lan2g0320 912 Pfam PLAT/LH2 domain 148 214 IPR001024 GO:0005515
Lan2g0320 912 Gene3D - 220 322 - -
Lan2g0320 912 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 76 219 IPR036392 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0320 Lan-Chr2 2805116 2811131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0320 1 911 Acyl Lipid Metabolism Gene Families AT1G17420 67.641 0.0 1315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0320 K00454 - gmx:100793614 1409.82