Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0238 ATGGCAATGGAAGAACACAGCTTAACTGAATGGCGCGCTCACTGTGGTCCCTACCTTGGAGACATTTCAGCTCTCTGTTTTCTTCACTTTCCCTCTCCCAATCACTCTCTTCCTTTTCTACTCGCTGGTTTGGGTTCGGAAATTATGGTGTACGACTTAGATGAAGGAAAGGTTATGAGGTCATTCTCTGTATTCCAGGGGATTCGTGTGCATGGAATTACGTCGAGTTTCCTACAACCTTCCCTAATTGCCGTGTTTGGGGAAACAAGAGTTAAACTATTTAGCTTCTCCTTTGATACTGTTCCACACTTGACACTCATTCATTTGTTGCCAAAGTTTGGTCACTGGGTTTTGGATGTTTGCTTCCTCAAGGGATGCTTATCTGATTCCAACGTAGACGGCCATTTTCTCGCCATAGGATGTAGCGACCATTCAGTTCATATCTGGGATATCTCCAAATCTATCACGGTTCTCAAGATCCAATCCCCAGTACGGTGCCTTTTGTACTCAATGCGTTTATGGGGTCATAATCTTGAAGATCTACGTATTGCATCTGGTACAATATTTAATGAGATTATTGTCTGGAAAGTGGCTTCTCATCACAATAAATCTTCAAGACGTGGAGAAGACCATTACAACCAGAGCGATTCATTCTCCATTTGCTTCCCACCAAAAGACCAACTGTATGAGGCTGTTCATATATGTAAACTTATTGGACATGAAGGCTCAATTTTCCGAATAGCATGGTCGTCTTGTGGATCTAAACTGCTATCTGTCTCTGATGACCGTAGTGCACGTGTCTGGGATGTTCCTATTGAAAGGCAAGATTCTTTATGCCACGACCCCGTTGCCCTAGTCTTATTTGGTCACAATGCTCGAGTTTGGGACTGCTGTATTTCTGATTTTTTGATTGTTACTGCCAGTGAGGATTGTACATGTCGTGTATGGGGAGTCAATGGTGAACAGCTGCAAATCATTAAGGATCACATAGGAAGAGGTATATGGAGATGTTTGTACGACCCAAATTTGTCAATTCTGATAACCGCTGGGTTTGACTCTGCTATTAAAGTGCATCGGCCTCGTGTTCCTATGAAAGGCCTTGCAGCAGCACAAGGCTCCCCTGGTGAGACAGAGATGTTTTCCGTTAGCATGCCTAATGTGTTGGAGCATAATGGACTCACAGACAGCAAAAGTGAATATGTTCGATGTCTGCGTTTTTCCCGTCAGGATACTCTTTATGTTTCTACCAATCATGGTTATCTCTACCATGCAAAATTATGTAGTTCTGGAGGTGCTCAGTGGAATCAACTTTTCCAGGTCAGCAACAGGGCACCAATTGTCTGTATGGATTTATTGTCGATGGATTCATTTGAACTTGAATGTGGTGTTGACGATTGGATTGCTATTGGAGATGGTAAAGGAAATATGACAGTTATTGAAGTTGCTAATGTCAATTGTACTCCTACTGTGAGATCGAGCATTACCTGGCCAGCTGAAATTGAGAGACAGCTGTTGGGTGCCTATTGGTGCAAATCTCTGGGATGTAGGTATGTCTTCACAGCTGATCCTAGAGGAACATTGAAACTCTGGAGGTTGCCTGACCCTTCACAATACAACCTTCAGAGCTCCATGAGCAGCAACAGTGTATCACATATAGCAGAATTCATATCAAGTTATGGAATGCGAATAATGTGTTTGGATGCAAGCATGGAGGAAGAGGTCCTAGCATGTGGAGATGTACGTGGTAATATAGTTCTGTTCCCTTTGCTGAAGAATCTAGTTTTGGGCACATATGTTACTCAAGAAGTGAAGGTACTTCCTGTTAATCATTTCAAAGGAGTTCATGGGATTTCAAGTGTGTCCAGTGTTTATGTGACTAAGTTTGGTTACAATCAGATTGAGATATGCTCAACCGGAGCAGATGGTTGTATATGCTATCTGGAATATGATAAAGATATGCAGAATTTGCAATTTACGGGGATGAAACAAGTGAAAGAGTTGACATTGATTGAACACGTTTCTGTCAATAACAACTCTGCTGATTCCTCGTCAAGCAGCTATGCAGCTGGTTTTGCATCAGTAGACTTCATAGTATGGAACTTAGCTAATGAGAATAAGGTGATGAAAATTTCTTGTGGAGGATGGCGTCGTCCTCATTCCTATTATCTTGGTGACGTACCAGAGATGAAAAACTGCTTTGCCTTTGTCAAGGATGAAATGATACATATACATAGACACTGGACTCATGATAGAGATAGGAAGATATACCCTCAGAGTTTGCATATGCAATTCCATGGGAGAGAGATACATTCTTTGTGCTTTATCTATGATGATATGCTTCTTGGAGATAATTATAAGCATACTTTATTATCTAAATCAAGTTGGATTGCAACTGGGTGTGAAGATGGAACTGTCAGGTTGACTTGGTATTCTCCAGGTATTGGAAATTGGTCGGCATCAAAATTGCTTGGTGAACATGTTGGAGGGTCAGCTGTAAGATCAATTTGTTGTGTATCAAAATTATACACTATTTCATCATATACAGATGATGTTTCTGATGCGAAGGGTGACTTGAATGCTGCTGATGAGGAGAAAGATAATCCGACCTTACTGATATCAGTAGGTGCGAAGCGTGTCTTAACTTCTTGGGTACTAAAAAATAGGAGACCGGAAACTGATCATCAGTACAATTCAAAAGAAGTTGATGAGTCAAGCTTGTTGGGTTCAATGACATTCCAGTGGCTTTCCACTGACATGCCAGCCAAATACTCTACCACACACAAATATCCAGTTAGTGATGTGGATAACGGTGTTATTGAAAATGTTTCTAATAATGCGAAACCTCAATCACCCTTTTCTGAAAGGGGAATGATGAACTTGGTCAGAGATAAGTATGAGGATGACTGGAGATATCTTGCCGTCACTGCTTTTCTTGTTAAATGTGCTAGTTCCAGAATATCGGTCTGCTTTGTTGTTGTTGCTTGTTCAGATGCTACACTTATGTTACGGGCTTTAATTTTGCCCTTTCGCTTATGGTTCGATGTCGCTTTGCTGGTTCCTTTATTGGCACCTGTTTTGTCATTGCAACATATCATCTTTCCCGTACATAAGCCTTATAAAGAAAATGTCCGTGTTGGAAATATTTACATTGTGATTAGTGGGTCCACTGATGGGAGTGTTGCTTTTTGGGACCTAACTGGCAGCGTTGAAGCTTTTATGCAGCGGGTTTCAGTTTATGATGTAGAGAAGTTTTTTGATTGTCAAAAACGTCCACGCACTGGGAGAGGGAGTCAGGGTGGTAGATTGTGGAGGTCTTTAAGGAGTGACTTGCGGAAGAAAAAACAAGGCAGCGGTCTGGTCACCTCAAAATCCAAATCCAAAGACAAGACCAAAAGCATAACTTGTGCTACACATGGGAGCCCTCCAACGCCTAACGATTCTGAAGATAGCAAGATGGTTTCTTCTCAAGCCATGGATACAGCTTCCCCTGAGTCAGAAATTAAGACTGATAATTCGTCAGTGGAAGTATGTGAAATACAGCCTCTACGCCATATGCAAAATATTCACCAATCTGGGGTTAACTGTCTCCATGTTTCAGAGATAAAGGGTGGCCACACTACTGACAGTTGTCATGTATACAGTATAATTAGTGGGGGTGATGATCAAGCACTTAATCATCTTATAGTTGAATTTTCACTTAAATCAACAAATTTAAGTAGTGAAGTTATGGCTCCGGATATAACACATTTGGTCTCTGAACCTGAAAATGAAAAGGATATCAATTATCAGATCAGATTCTTAATTCATGAAAATATTCCGTCGGCCCACAGCGCTTCTGTGAAAGGTGTCTGGACTGATGGATCTTGGGTGTTTTCGACCGGACTTGATCAGCGGGTCCGATGCTGGCATCTACGGGAGAGTAAACTAATTGAGCATGCACATCTAGTAGTTAGTGTGCCAGAGCCAGAAGCGCTATCCGCTAGAGCTTGTGGCAGGAATCATTATCAGATTGCTGTTGCTGGAAGAGGAATGCAAATAGTTGACTTTTCAGAATCCTGA 4059 0.4161 MAMEEHSLTEWRAHCGPYLGDISALCFLHFPSPNHSLPFLLAGLGSEIMVYDLDEGKVMRSFSVFQGIRVHGITSSFLQPSLIAVFGETRVKLFSFSFDTVPHLTLIHLLPKFGHWVLDVCFLKGCLSDSNVDGHFLAIGCSDHSVHIWDISKSITVLKIQSPVRCLLYSMRLWGHNLEDLRIASGTIFNEIIVWKVASHHNKSSRRGEDHYNQSDSFSICFPPKDQLYEAVHICKLIGHEGSIFRIAWSSCGSKLLSVSDDRSARVWDVPIERQDSLCHDPVALVLFGHNARVWDCCISDFLIVTASEDCTCRVWGVNGEQLQIIKDHIGRGIWRCLYDPNLSILITAGFDSAIKVHRPRVPMKGLAAAQGSPGETEMFSVSMPNVLEHNGLTDSKSEYVRCLRFSRQDTLYVSTNHGYLYHAKLCSSGGAQWNQLFQVSNRAPIVCMDLLSMDSFELECGVDDWIAIGDGKGNMTVIEVANVNCTPTVRSSITWPAEIERQLLGAYWCKSLGCRYVFTADPRGTLKLWRLPDPSQYNLQSSMSSNSVSHIAEFISSYGMRIMCLDASMEEEVLACGDVRGNIVLFPLLKNLVLGTYVTQEVKVLPVNHFKGVHGISSVSSVYVTKFGYNQIEICSTGADGCICYLEYDKDMQNLQFTGMKQVKELTLIEHVSVNNNSADSSSSSYAAGFASVDFIVWNLANENKVMKISCGGWRRPHSYYLGDVPEMKNCFAFVKDEMIHIHRHWTHDRDRKIYPQSLHMQFHGREIHSLCFIYDDMLLGDNYKHTLLSKSSWIATGCEDGTVRLTWYSPGIGNWSASKLLGEHVGGSAVRSICCVSKLYTISSYTDDVSDAKGDLNAADEEKDNPTLLISVGAKRVLTSWVLKNRRPETDHQYNSKEVDESSLLGSMTFQWLSTDMPAKYSTTHKYPVSDVDNGVIENVSNNAKPQSPFSERGMMNLVRDKYEDDWRYLAVTAFLVKCASSRISVCFVVVACSDATLMLRALILPFRLWFDVALLVPLLAPVLSLQHIIFPVHKPYKENVRVGNIYIVISGSTDGSVAFWDLTGSVEAFMQRVSVYDVEKFFDCQKRPRTGRGSQGGRLWRSLRSDLRKKKQGSGLVTSKSKSKDKTKSITCATHGSPPTPNDSEDSKMVSSQAMDTASPESEIKTDNSSVEVCEIQPLRHMQNIHQSGVNCLHVSEIKGGHTTDSCHVYSIISGGDDQALNHLIVEFSLKSTNLSSEVMAPDITHLVSEPENEKDINYQIRFLIHENIPSAHSASVKGVWTDGSWVFSTGLDQRVRCWHLRESKLIEHAHLVVSVPEPEALSARACGRNHYQIAVAGRGMQIVDFSES* 1353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0238 1352 Gene3D - 2 230 IPR015943 GO:0005515
Lan2g0238 1352 Gene3D - 1042 1320 IPR015943 GO:0005515
Lan2g0238 1352 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 410 837 IPR011047 -
Lan2g0238 1352 SUPERFAMILY WD40 repeat-like 20 358 IPR036322 GO:0005515
Lan2g0238 1352 Pfam WD domain, G-beta repeat 235 269 IPR001680 GO:0005515
Lan2g0238 1352 Pfam WD domain, G-beta repeat 288 316 IPR001680 GO:0005515
Lan2g0238 1352 Pfam WD domain, G-beta repeat 114 150 IPR001680 GO:0005515
Lan2g0238 1352 SUPERFAMILY WD40 repeat-like 232 1308 IPR036322 GO:0005515
Lan2g0238 1352 MobiDBLite consensus disorder prediction 1133 1172 - -
Lan2g0238 1352 Gene3D - 509 878 IPR015943 GO:0005515
Lan2g0238 1352 Gene3D - 283 504 IPR015943 GO:0005515
Lan2g0238 1352 MobiDBLite consensus disorder prediction 1090 1172 - -
Lan2g0238 1352 ProSitePatterns Trp-Asp (WD) repeats signature. 256 270 IPR019775 -
Lan2g0238 1352 Gene3D - 231 282 IPR015943 GO:0005515
Lan2g0238 1352 ProSiteProfiles Trp-Asp (WD) repeats profile. 237 270 IPR001680 GO:0005515
Lan2g0238 1352 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 237 270 - -
Lan2g0238 1352 SMART WD40_4 1261 1303 IPR001680 GO:0005515
Lan2g0238 1352 SMART WD40_4 756 809 IPR001680 GO:0005515
Lan2g0238 1352 SMART WD40_4 319 359 IPR001680 GO:0005515
Lan2g0238 1352 SMART WD40_4 487 531 IPR001680 GO:0005515
Lan2g0238 1352 SMART WD40_4 548 588 IPR001680 GO:0005515
Lan2g0238 1352 SMART WD40_4 103 150 IPR001680 GO:0005515
Lan2g0238 1352 SMART WD40_4 1026 1064 IPR001680 GO:0005515
Lan2g0238 1352 SMART WD40_4 230 269 IPR001680 GO:0005515
Lan2g0238 1352 SMART WD40_4 4 52 IPR001680 GO:0005515
Lan2g0238 1352 SMART WD40_4 280 317 IPR001680 GO:0005515
Lan2g0238 1352 PANTHER WD REPEAT PROTEIN 15 1350 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0238 K24737 - gmx:100780968 2094.7