Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0217 ATGATGGAGTCGTGTGATTGTATCGATACACCATATCCACCAGATGAACTTCTTATCAAGTATCAGTATATCTCAGATGTCCTAATTGCCCTTGCATATTTCTCAATTCCTGTAGAACTAATCTATTTTGTTCAGAAGTCAGCTTTCTTTCCATATAGATGGGTCCTTATGCAGTTTGGTGCTTTTATTGTCCTTTGTGGAGCAACACATTTCATAAACTTGTGGACATTCTCTATGCACTCCAAATCTGTTGCTGTGGTAATGACAGTTGCCAAGGTTTCATGTGCTATTGTGTCGTGCGCGACCGCATTGATGCTTGTACACATCATTCCTGATCTCTTGAGTGTCAAAACTCGTGAATTGTTCCTGAAGAACAAGGCTGAGGAGCTTGATCGAGAGATGGGGCTTATTCTTACTCAAGAAGAAACCGGACGTCATGTTAGGATGTTGACTCATGAAATTAGGAGCACACTTGACCGGCATACCATTCTCAAGACTACTCTTGTTGAGCTGGGTAGGACATTAGGTTTGGAGGAATGTGCATTATGGATGCCATCAAGAAGTGGATTGAATCTGCAACTTTCACATACTTTAACTTGCCATGTTCAAGTTGGGTCTACTTTGCCGACTAACCTTCCTATTATTAATGAAGTTTTTAGTAGCCCTCGAGCTACGCGGATACCGCACACCTGTCCACTAGCCAGGATCAAGCCTCTTGTTGGGAGATATGTGCTGCCTGAAGTTGTTGCTGTTAGGGTGCCTCTTCTGCATCTCTCAAATTTCCAAATTAATGATTGGCCTGATCTTTCAGCAAAAAGCTATGCAATTATGGTTCTTATACTCCCTACTGATAGTGCTAGAAAATGGAGAGACCATGAGTTGGAACTTGTTGAAGTTGTTGCAGATCAGGTAGCTGTTGCCCTTTCACATGCTGCTATTTTGGAGGAGTCTATGCGAGCCCATGATCAACTCATGGAGCAGAATGTTGCTTTAGATTTAGCTCGGCAAGAGGCAGAGGTGGCAATTCATGCTCGCAATGATTTCCTTGCTGTAATGAATCATGAAATGAGGACGCCAATGCATGCAATTATAGCATTGTCATCACTTCTCTTGGAAACTGAACTGACTCCAGAGCAGAGGGTTATGATAGAGACAGTGTTGAAGAGTAGTAATGTTTTGGCAACGCTTATCAATGATGTTCTAGATCTTTCTCGATTGGAAGATGGTAGCCTTGAATTAGAAATGGGAAAACTTAACCTTCATGGTGTTTTGGGAGAGGTCGTCCATCTGATAAAGCCTATAGCATCTGTGAAAAAATTGCCTATTACTTTAATTCTAGCCCCTGATCTACCTGTGTTTGCCATTGGTGATGAAAAACGGCTTTTGCAAACTCTTTTAAATGTTGTAGGTAATGCTGTTAAATTCACTAAGGAGGGTTATGTTTCTATAAGAGCATCGGTTGCCAAACCAGAATCTTTACAGGATTCACGACCTCCTGAGTTTTATCCAGCATCAAGTGATGCCAATTTCTACATGCGAGTACAGGTTAAGGATTCTGGAAGTGGTATTCTCCCACAAGACATTCCACATCTCTTTACCAAGTTCGCTCAGTCTCGGAGTGTATCGGCTCGACCCAGCAGTAGTGAAGGCCTTGGGCTTGCAATTTGTAAAAGATTTGTAAATCTCATGGGAGGTCACATATGGATTGAGAGTGAGGGGCTTGATAAAGGAAGCACAGTTACATTCATAATCAAATTTGGGATTAGTGGCAATACAGATTCATCAGATAATAATGCTGCAAAGATAGGCCAAGCATATAGTGGAAGTGGAGGCCTAGCTAGATATAAACTATTTGTCAAAGATGGTGACAACACAGGTTTTTCTAGTTGA 1890 0.4164 MMESCDCIDTPYPPDELLIKYQYISDVLIALAYFSIPVELIYFVQKSAFFPYRWVLMQFGAFIVLCGATHFINLWTFSMHSKSVAVVMTVAKVSCAIVSCATALMLVHIIPDLLSVKTRELFLKNKAEELDREMGLILTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLGLEECALWMPSRSGLNLQLSHTLTCHVQVGSTLPTNLPIINEVFSSPRATRIPHTCPLARIKPLVGRYVLPEVVAVRVPLLHLSNFQINDWPDLSAKSYAIMVLILPTDSARKWRDHELELVEVVADQVAVALSHAAILEESMRAHDQLMEQNVALDLARQEAEVAIHARNDFLAVMNHEMRTPMHAIIALSSLLLETELTPEQRVMIETVLKSSNVLATLINDVLDLSRLEDGSLELEMGKLNLHGVLGEVVHLIKPIASVKKLPITLILAPDLPVFAIGDEKRLLQTLLNVVGNAVKFTKEGYVSIRASVAKPESLQDSRPPEFYPASSDANFYMRVQVKDSGSGILPQDIPHLFTKFAQSRSVSARPSSSEGLGLAICKRFVNLMGGHIWIESEGLDKGSTVTFIIKFGISGNTDSSDNNAAKIGQAYSGSGGLARYKLFVKDGDNTGFSS* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0217 629 ProSiteProfiles Histidine kinase domain profile. 351 588 IPR005467 -
Lan2g0217 629 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 330 410 IPR036097 GO:0000155|GO:0007165
Lan2g0217 629 SMART HKATPase_4 456 588 IPR003594 -
Lan2g0217 629 Pfam GAF domain 159 308 IPR003018 GO:0005515
Lan2g0217 629 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 2 621 - -
Lan2g0217 629 SUPERFAMILY GAF domain-like 162 311 - -
Lan2g0217 629 Gene3D - 409 591 IPR036890 -
Lan2g0217 629 Pfam His Kinase A (phospho-acceptor) domain 345 409 IPR003661 GO:0000155|GO:0007165
Lan2g0217 629 SMART gaf_1 159 318 IPR003018 GO:0005515
Lan2g0217 629 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 398 586 IPR036890 -
Lan2g0217 629 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 456 586 IPR003594 -
Lan2g0217 629 CDD HisKA 342 405 IPR003661 GO:0000155|GO:0007165
Lan2g0217 629 SMART HisKA_10 344 409 IPR003661 GO:0000155|GO:0007165
Lan2g0217 629 Gene3D - 139 309 IPR029016 -
Lan2g0217 629 PANTHER ETHYLENE RESPONSE SENSOR 1 2 621 - -
Lan2g0217 629 PRINTS Bacterial sensor protein C-terminal signature 512 526 IPR004358 GO:0016310|GO:0016772
Lan2g0217 629 PRINTS Bacterial sensor protein C-terminal signature 530 540 IPR004358 GO:0016310|GO:0016772
Lan2g0217 629 PRINTS Bacterial sensor protein C-terminal signature 547 565 IPR004358 GO:0016310|GO:0016772
Lan2g0217 629 Gene3D - 310 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0217 Lan-Chr2 1801269 1806206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0217 2 600 Miscellaneous Gene Families AT2G40940 76.628 0.0 924
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0217 K14509 - gmx:100802569 1093.57