Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0215 ATGGATCACATTACAAAACTCTTCTTGGCCTTGGCTCTCTGTGTTGTTGTAATGGCACACCAAACCGTGGCAATAAATTTCATAAAAGGCAAGAACCTAATCAACAATGTATGCAACCTATCCCCAACAAGGAACCTATGTGTTCAAGTACTTTCCTCCGACGAATCAAGCCCAAACGCGGACCTACGAGATTTGGCGGTTATCGCATTGAGGGTTGCGGCTTCGAACGCTTCAAGCATCCTTACCGATGCCAAGATGCTTATCGATGATGCCAATTTAAACCCCGAAGTTCAACAAGGCTTATCTGACTGCAAAGAAAATATCTTAGACGCCGAGGATCAACTAGAGGATACAATTGCCGCGTTGTTGGAAGATGATGACACTCAAGCTCAAAAATGGTTGAAGGCTGCTTTGGCCGCTATTACAACATGTGATGCTTCTATTCCCGGAGATGATGATGTTCTCTCAGTGAAGAGTGCTCAATTTAGGCAATTGTGTAATATTGCCATAGTCATCACTAAGGCCTTGCCAAATCTTAAATTTTAA 546 0.4304 MDHITKLFLALALCVVVMAHQTVAINFIKGKNLINNVCNLSPTRNLCVQVLSSDESSPNADLRDLAVIALRVAASNASSILTDAKMLIDDANLNPEVQQGLSDCKENILDAEDQLEDTIAALLEDDDTQAQKWLKAALAAITTCDASIPGDDDVLSVKSAQFRQLCNIAIVITKALPNLKF* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0215 181 CDD PMEI-like_1 33 176 - -
Lan2g0215 181 PANTHER PECTINESTERASE 1 177 - -
Lan2g0215 181 Pfam Plant invertase/pectin methylesterase inhibitor 32 171 IPR006501 GO:0004857
Lan2g0215 181 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 1 177 - -
Lan2g0215 181 Coils Coil 101 125 - -
Lan2g0215 181 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 176 IPR035513 -
Lan2g0215 181 SMART PMEI_2 29 172 IPR006501 GO:0004857
Lan2g0215 181 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 176 IPR035513 -
Lan2g0215 181 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 175 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0215 Lan-Chr2 1794789 1795503 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0215 - - gmx:102667060 244.973