Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0509 ATGTCTTCAATTAGAATCCTCTCCATTTTTCTCTCTCTATCCCTAACCTACGCTCTATCCCAACAAGAAACGTTATCAGCATACGAAATTCTCGAACAATATGGCTTCCCACCAGGTATTCTCCCAAAGGGCATCACAGGCTACACTCTCAACAGAGAAACGGGTCAATTCGCTGCGTATTTGGAAGGAACATGCAGCTTTGCCATAAAGTCGTATACCCTAAAGTACAAGTCAACTATCACGGGTGTTATCTCTAACGGTAAGCTATCTAAGTTGAAAGGTGTGTCCGTTAAGGTTGTTCTTTTGTGGCTTAACGTCGTTGAGGTGGTTCTTGATGGTGATGTTCTCGAGTTCTCTATGGGTATCGCTTCTGCAAATTTGGGAGTGCATAACTTTCGAGAGAGTCCTCAGTGTGGGTGTGGATTCTATTGCAGTGATAAATTGTTCCAAATCGGTGATGTTTCTTCAGTTTAA 474 0.4262 MSSIRILSIFLSLSLTYALSQQETLSAYEILEQYGFPPGILPKGITGYTLNRETGQFAAYLEGTCSFAIKSYTLKYKSTITGVISNGKLSKLKGVSVKVVLLWLNVVEVVLDGDVLEFSMGIASANLGVHNFRESPQCGCGFYCSDKLFQIGDVSSV* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0509 157 Gene3D - 12 136 IPR036758 -
Lan20g0509 157 PANTHER T31J12.3 PROTEIN-RELATED 7 147 IPR007493 -
Lan20g0509 157 SUPERFAMILY At5g01610-like 5 144 IPR036758 -
Lan20g0509 157 Pfam Protein of unknown function, DUF538 27 132 IPR007493 -
Lan20g0509 157 PANTHER DUF538 FAMILY PROTEIN 7 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0509 Lan-Chr20 3766506 3766979 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0509 - - gmx:100500182 167.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan20g0509 20 3766506 3766979 Lan4g1392 4 22991119 22991927 LSH
Lan4g0992 4 13735849 13736433 Lan20g0509 20 3766506 3766979 PCT
Lan20g0509 20 3766506 3766979 Lan4g0992 4 13735849 13736433 PCT