Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan20g0107 ATGAAGATCACAGTCTTACAATACTTAGGAATGTTGTTCCTCAATGTCCTTATCACTTGCCAGGCACTGAGGCATCATAAATTTGTGGTTAGAGATGCTCCCTACACAAAGCTTTGCAGCACAAAGAACATTTTGACCGTAAATGGCCAATTTCCTGGACCAACCCTATATGTTACCAAAGGAGAAACCATCATTGTTGATGTGTATAACCGAGCTAACTATAACATCACCATCCACTGGCATGGAGTGAACCAACCGAGATATCCATGGTCAGATGGACCTGAATATATAACACAATGTCCAATTCGACCTGGTGGAAAGTTCAGTCAGAAGGTTATATTTTCTGAAGAGGAAGGAACTCTTTGGTGGCATGCTCATAGTGACTGGTCTCGGGCCACAGTTCATGGGATGATTGTGGTCAAACCCACTTCTGGAACTACATATCCATTTCCAAAACCACACAAAGAGGTCCCCATTATACTAGGTGAATGGTGGAAGAAAGACATTGTAGAGGTTTACAATGAATTTCGTAGAACTGGAGGAGATGCCAATATTTCTGATGCTTATACTATTAATGGTCAACCTGGTGATCTATATCCATGCTCAAGTAATGAAACCTTCAAGCTTAGGGTTGACTATGGCAAAACCTATCTTCTCCGAATGGTGAATGCAGCAGTACAAGACATGCTCTTCTTTGCAATTTCCAAACATCAAGTGACAATAGTAGGAAGTGATGGAAACTATGTAAAACCACTGAAGGTAGATTATATCACAATATCACCTGGACAAACAATGGATGTGTTACTTGAAGCAAACCAACCATTAGGTCAATATTACATGGCTTCTAAAGTATATTCCAGTGCTAATGGTGTTGAATTTGATAACACCACAACCACTGCTATTATACAATATAAAGGAAACTACATTCCATCTTCAACTACCCTTTCTTTACCTTCACTACCAGCTTCTGATGATACCATGGCCTCAATCAACCTCATTAGTCAACTTAAAAGCTTGAATGATAACCAACACCAAATTGATGTGCCTTTAAACATAACCACCAACCTTTTCTTCACAACCTCAGTTAACACATTACCATGTTCAAATGATTCAACATGTGCACTTCCTGGTAATAACCGCCTTTCTGCTAGCATGAACAACATAAGCTTCCAACTACCTTCAAACAACAACATTTTACAGGCTTACTACAACAACATTAGTGGTGTCTTTGGAGAAAATTTCCCTAACGTGCCACCATTGTTGTTTGATTTCACTGGTAATAACTTGCCTGCATATCTAGCTACTCCATCAGTGGCTACTGAGGTTAATGTGCTTGAGTATAACTCAACAGTTGAACTTGTTCTTCAATCGACTAATATCCTGGCTGGTACAGAACATCCTATTCATTTACATGGACACAGTTTCTATGTTGTGGGATGGGGATTTGGGAACTTTGATAAGGACAAGGATCCTTTGAACTACAATCTTATTGACCCTCCTTATCAGAATACTGTAGCAATACCCAAAAATGGTTGGACAGCCATAAGATTCAGAGCCAAAAACCCAGGTGTATGGTTTGTGCATTGCCATTTAGAGCGTCATGTAAGTTGGGGAATGGCTATGACTTTCATTGTCAAAAATGGTGACAAGACAGAAGAGAAGATGTTACCACCACCACCAGACATGCCTCAATGTTAA 1698 0.3975 MKITVLQYLGMLFLNVLITCQALRHHKFVVRDAPYTKLCSTKNILTVNGQFPGPTLYVTKGETIIVDVYNRANYNITIHWHGVNQPRYPWSDGPEYITQCPIRPGGKFSQKVIFSEEEGTLWWHAHSDWSRATVHGMIVVKPTSGTTYPFPKPHKEVPIILGEWWKKDIVEVYNEFRRTGGDANISDAYTINGQPGDLYPCSSNETFKLRVDYGKTYLLRMVNAAVQDMLFFAISKHQVTIVGSDGNYVKPLKVDYITISPGQTMDVLLEANQPLGQYYMASKVYSSANGVEFDNTTTTAIIQYKGNYIPSSTTLSLPSLPASDDTMASINLISQLKSLNDNQHQIDVPLNITTNLFFTTSVNTLPCSNDSTCALPGNNRLSASMNNISFQLPSNNNILQAYYNNISGVFGENFPNVPPLLFDFTGNNLPAYLATPSVATEVNVLEYNSTVELVLQSTNILAGTEHPIHLHGHSFYVVGWGFGNFDKDKDPLNYNLIDPPYQNTVAIPKNGWTAIRFRAKNPGVWFVHCHLERHVSWGMAMTFIVKNGDKTEEKMLPPPPDMPQC* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan20g0107 565 ProSitePatterns Multicopper oxidases signature 1. 523 543 IPR033138 -
Lan20g0107 565 Gene3D - 154 342 IPR008972 -
Lan20g0107 565 SUPERFAMILY Cupredoxins 21 167 IPR008972 -
Lan20g0107 565 PANTHER LACCASE 11 565 - -
Lan20g0107 565 CDD CuRO_3_LCC_plant 409 548 IPR034289 GO:0005507
Lan20g0107 565 CDD CuRO_2_LCC_plant 157 304 IPR034285 -
Lan20g0107 565 Gene3D - 369 565 IPR008972 -
Lan20g0107 565 CDD CuRO_1_LCC_plant 26 142 IPR034288 GO:0005507
Lan20g0107 565 Pfam Multicopper oxidase 156 307 IPR001117 -
Lan20g0107 565 ProSitePatterns Multicopper oxidases signature 2. 528 539 IPR002355 GO:0005507
Lan20g0107 565 TIGRFAM laccase: laccase 23 565 IPR017761 GO:0046274|GO:0048046|GO:0052716
Lan20g0107 565 Pfam Multicopper oxidase 417 548 IPR011706 GO:0005507|GO:0016491
Lan20g0107 565 Gene3D - 24 151 IPR008972 -
Lan20g0107 565 SUPERFAMILY Cupredoxins 353 565 IPR008972 -
Lan20g0107 565 PANTHER MULTI-COPPER OXIDASE 11 565 IPR045087 -
Lan20g0107 565 Pfam Multicopper oxidase 31 143 IPR011707 GO:0005507
Lan20g0107 565 SUPERFAMILY Cupredoxins 150 334 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan20g0107 Lan-Chr20 636505 639231 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan20g0107 K05909 - qsu:112034097 869.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan20g0107 20 636505 639231 Lan20g0107 20 636505 639231 ECH