Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g2073 ATGGGTTGCACTCTTTCTAAACTCGACAACGACGACACCGTCCGCCGTTGTAAACACCGTCGCCGCCTCATTAAGGATGCCTTATACGCTCGCCACCACCTCTCCACCGCCCACTCCGACTACTGCCGCTCCCTCCGCCTCACCGCCACTGCCCTCTCCACCTTCGCCTCTGGTGAACCCCTCTCCGTCTCCCTCAACACCCCCGCCGTCTTCCTCAACCCCAACAACCACCCACCACCGCCACCACCGCCACCACCACCACCACCGCCGCCGCAACATAAAAAATCCCCCTCTCCTCCACCCATAATTAAAAACCCCAAACTCCCTCCTTCCACCACCACTACAACCGCCGTCAACCACCACCAACGCCGCCGTAAAAAAGAAATTAAACTCCCTCATATACTCTCGGAATCGTCGTTATCTTCTTATTGTTCTTCGCCACGTAACCATTCATCGAATTTTCCTTCTAACTTTTTTCCCATTGCTCATCAAACACATTCTACTACACATTCTGAAACCTCTTCTGTTTGGAACTGGGATCAGTTCTATCCTCCTCCAACCCCTCCCGGTTACGAGAGTGAGAGCGAAAAAACCGAAAATGGTGAAGAGTGCGATGAGACAGAGAGAGAAGAGGTTCAGTGTAGTGAGTGGGGGGATCATTACAGCACCACGAGTTCTTCTGAAGAGGATGGTGAGGATTTGAGGTCGGAGACGGTGGCTCCGGCGATGTCTCCGGCAGTGGCTCCGGCGAAGGAAGAGAAAGTTAGGGAGATGAAGGTGATGGTGAGGCATAAGGATTTGAAGGAAATAGTGGAAGCGATAAGGGATAATTTTGAGAAGGCTGCGGTTGCCGGAGAAAAGTTATCGGAGATTCTTGAGATCGGAAAAGCTCAGCTTGATCGGAGTTTCACACAATTGAGGAAAACTGTGTATCATTCAAGTAGTTTATTGAGCAGTCTAAGCTCTACTTGGACCTCAAAACCACCATTAGCTGTTAAGTACCGGTTCAACACCGGTTCACTTCACGGACCGGGCGGTCCAAAGAGTCTCTCTTCCACTTTGGAATGTCTCTTCGCTTGGGAGAAAAAGCTCTACAAGGATGTTAAGGCCAGAGAAGGTGTGAAGATTGAGCATGAAAAGAAATTGTCAGCACTACAGAGTGAGGAATACAAAGGGGGTAATGAAGCAAAGCTAGAGAAAACCAAGGCTTGTATAACAAGGTTGCAATCACTTATTATTGTCACATCTCAAGCTGTCTCTACCACCTCAAATGCCATTAATGGCCTTAGGGACTCTGATCTTGTTCCTCAGCTTGTTGAGCTCTGTCATGGAATAATGTATATGTGGAGATCAATGCACCAGTACCATGAAGTTCAAAGCAACATTGTGCAGCAAGTCCGCGGCCTTGTGAACCAATCATCGAAAGGTCACTCAACATCCGAGCTGCACAGGCAGGCAACTCGCGATCTTGAATCGGCTGTATCAGCTTGGCACTCCAGTTTTTGTCGCCTTATAAAATTCCAACGCGACTTTATTCGGTCTTTACATGGCTGGTTTAAGCTCAACCTTATTCCAGTCAGCAATGACAGCATCAACAACAACAACTGCAAGGAACAACCATCTGATGCGTTTTCCTTTTGTGACGAATGGAAGCTCGCTCTTGATCGCGTCCCAGACACCGTTGCTTCTGAAGCAATCAAAAGCTTTATTAATGTTGTCCATGTAATATCTGTCAAACAATCCGAAGAGCTCAAGATTAGAAAGCAAACAGAGGCTGCTTCCAAGGAACTTGAGAAGAAATCGTCATCGGTACAAAACTTAGAAAGGAAGTTTTACAACTCATATTCTACAGTAGGCATTGGCCTTCCTGACTCTATTTCTGATAATGGACAAAGCTTGGATGCACGAGACCCACTCGCCGAGAAGAAATTGGAATTAGCAGCGCGCCGAAGGCGTGTTGAAGATGAAATGGTGAGACATTCAAAGGCTGTAGAGGTGACAAGAGCTATGACACTCAACAATCTACAAACAGGTTTGCCTGGAGTTTTTCAAGCACTAACCAGTTTTTCTTCTTTATTCACTGAGTCTTTGGAATCAGTATGTACAAGTTCATATTCCATCAAGTAG 2127 0.4711 MGCTLSKLDNDDTVRRCKHRRRLIKDALYARHHLSTAHSDYCRSLRLTATALSTFASGEPLSVSLNTPAVFLNPNNHPPPPPPPPPPPPPPQHKKSPSPPPIIKNPKLPPSTTTTTAVNHHQRRRKKEIKLPHILSESSLSSYCSSPRNHSSNFPSNFFPIAHQTHSTTHSETSSVWNWDQFYPPPTPPGYESESEKTENGEECDETEREEVQCSEWGDHYSTTSSSEEDGEDLRSETVAPAMSPAVAPAKEEKVREMKVMVRHKDLKEIVEAIRDNFEKAAVAGEKLSEILEIGKAQLDRSFTQLRKTVYHSSSLLSSLSSTWTSKPPLAVKYRFNTGSLHGPGGPKSLSSTLECLFAWEKKLYKDVKAREGVKIEHEKKLSALQSEEYKGGNEAKLEKTKACITRLQSLIIVTSQAVSTTSNAINGLRDSDLVPQLVELCHGIMYMWRSMHQYHEVQSNIVQQVRGLVNQSSKGHSTSELHRQATRDLESAVSAWHSSFCRLIKFQRDFIRSLHGWFKLNLIPVSNDSINNNNCKEQPSDAFSFCDEWKLALDRVPDTVASEAIKSFINVVHVISVKQSEELKIRKQTEAASKELEKKSSSVQNLERKFYNSYSTVGIGLPDSISDNGQSLDARDPLAEKKLELAARRRRVEDEMVRHSKAVEVTRAMTLNNLQTGLPGVFQALTSFSSLFTESLESVCTSSYSIK* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g2073 708 PANTHER UNCHARACTERIZED 1 150 - -
Lan1g2073 708 PANTHER UNCHARACTERIZED 154 192 - -
Lan1g2073 708 PANTHER UNCHARACTERIZED 192 708 - -
Lan1g2073 708 MobiDBLite consensus disorder prediction 73 107 - -
Lan1g2073 708 Coils Coil 590 610 - -
Lan1g2073 708 Pfam Protein of unknown function (DUF632) 267 574 IPR006867 -
Lan1g2073 708 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Lan1g2073 708 PANTHER TRANSCRIPTION FACTOR BZIP80, PUTATIVE-RELATED 154 192 - -
Lan1g2073 708 PANTHER TRANSCRIPTION FACTOR BZIP80, PUTATIVE-RELATED 1 150 - -
Lan1g2073 708 PANTHER TRANSCRIPTION FACTOR BZIP80, PUTATIVE-RELATED 192 708 - -
Lan1g2073 708 MobiDBLite consensus disorder prediction 172 239 - -
Lan1g2073 708 MobiDBLite consensus disorder prediction 66 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g2073 Lan-Chr1 35932219 35938722 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g2073 1 67 Acyl Lipid Metabolism Gene Families AT2G27090 38.235 1.36e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g2073 - - gmx:100792843 872.078
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g2073 1 35932219 35938722 Lan8g0080 8 1192984 1199844 PCT