Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g2051 ATGGAAGACACAGACTCAGTTGCCACACTGATGGATTCTACATCTTCCAAGATACAACAGCTCCAAAAGGCATTTGCTGAACTTGAAAGTTATCGAGCTGTTACACTGAACTTGAAGTGGAAAGAACTTGAGGAACATTTTCATGGACTTGAGAAATCCTTGAAGAGACGCTTTCATGAATTGGAAGACCAAGAGAAAGAGTTTGAAAACAAAACAATGAAAGCTCAGGAAATTGTGAAGAAGCGGGAAGCAGCTGTTTTTGCCAAGGAGCAAGCTACGTTGCAGAAGCTTCAAGAGAAAAGGGATGCTGCTGTACTTGCCATTGTAAATGCTCGAGAAAAACACAGGAAAGTTTCATCAAATGGGACGGGTATTGTCTCGGATGGGGGTCATTGGACACCAGAAGTGCAGGAGAAGCAAGTGGATAGTGTGTCCGTTGCTGCTGAAGGCAACTTAGAAGATGTGAAAACTTCTCCTGGAAGTGGAAATGTGGAGTTGATGTCTTATCCAAAGTTGGTCAAACTTTGTGAAGAGATGGATGCTGGAGGACTTCACAAATTTATTTCTGATAACCGTAAGAACCTTGCTGCTCTAAGGGAGGAATTACTGCTAGCGTTAAGAGATGCTCCTGATGCTGCTTGTTTAGTTTTAGATTCTTTGGAAGGATTTTACTCTATGGATGTGCCGCATCAAGATGCAAAGAAGGATGCAAACTTATTAGGTCTTCGCCGAACCTGTATCATGCTGATGGAGTGCCTAAGTGTTCTGCTAACAAACTTAGACAGTGTCTCTGATGTGATTTCAGAAGATACCAAGGTAAAGGCAAAGACAGTTGCTGAAGAGTGGAAACCAAGATTAGACGCGCTTGACATAGATGCTAGCAATGGGAATTCCTTGGAGGCTCATGCATTTCTGCAACTTATAGCAAGTTTTGGTATTGCCTCTGATTTTAATGAGGAGGAATTGTCCAGGCTGATTCCAATGGTGTCTCGGCGTCGACAAACTGCTGATTTATGTCGTTCCCTTGGGTTGTCTGAGAAGATGCCTGGTGTAATCGAAATTTTGGTGAACAGTGGGCGTCAAATTGATGCAGTTAACTTGGCTTTTGCATTTGATCTTACAGGACAGTTTTCTCCTGTGCCTTTACTGAAGTCTTACTTGAATGATGCTAGAAAAGCTTCTCCTGTCAAAAGTGTTAACTCTTCTCCCACTGCACAGATTGAGGTTAATGAAAGGGAGCTAATTGCTCTTAAGGTTGTAATAAAATGCATTGAGGAACATAAACTTGATGAGGAGTATCCTCTGGATCCTCTCCAGAAACGAATGATTCAACTAGAGAAGGCCAAAGCTGACAAGAAAAGAGAAACCGAAGCGACAAAGCCTCAACCTAAGAGACCCCGTGCTAATGGTGCTGGATACGGTCCCCGGGTCACTAACATTCCTTCTGATAAACTTTGCTATGCTAGAGCTGCTGACAGGTATCCACAACAGTATGTGTATGACCGGCCTTACATGTACGCCGGACCAACTGACAATCATTGCCCCCCTCTCCTGGGCTCTGCAACTTACAACTTTTCTCAGAGTCATGGCAATTACTTTGGGAATAGCTATCATTACCAAGCTACATATCTGCACTAG 1638 0.4322 MEDTDSVATLMDSTSSKIQQLQKAFAELESYRAVTLNLKWKELEEHFHGLEKSLKRRFHELEDQEKEFENKTMKAQEIVKKREAAVFAKEQATLQKLQEKRDAAVLAIVNAREKHRKVSSNGTGIVSDGGHWTPEVQEKQVDSVSVAAEGNLEDVKTSPGSGNVELMSYPKLVKLCEEMDAGGLHKFISDNRKNLAALREELLLALRDAPDAACLVLDSLEGFYSMDVPHQDAKKDANLLGLRRTCIMLMECLSVLLTNLDSVSDVISEDTKVKAKTVAEEWKPRLDALDIDASNGNSLEAHAFLQLIASFGIASDFNEEELSRLIPMVSRRRQTADLCRSLGLSEKMPGVIEILVNSGRQIDAVNLAFAFDLTGQFSPVPLLKSYLNDARKASPVKSVNSSPTAQIEVNERELIALKVVIKCIEEHKLDEEYPLDPLQKRMIQLEKAKADKKRETEATKPQPKRPRANGAGYGPRVTNIPSDKLCYARAADRYPQQYVYDRPYMYAGPTDNHCPPLLGSATYNFSQSHGNYFGNSYHYQATYLH* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g2051 545 Coils Coil 435 455 - -
Lan1g2051 545 Coils Coil 51 81 - -
Lan1g2051 545 Pfam Frigida-like protein 168 456 IPR012474 -
Lan1g2051 545 PANTHER FRIGIDA-LIKE PROTEIN 3 545 - -
Lan1g2051 545 MobiDBLite consensus disorder prediction 448 475 - -
Lan1g2051 545 Coils Coil 94 114 - -
Lan1g2051 545 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 3 545 - -
Lan1g2051 545 MobiDBLite consensus disorder prediction 448 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g2051 Lan-Chr1 35615183 35620161 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g2051 - - aprc:113851605 877.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0056 12 510870 512646 Lan1g2051 1 35615183 35620161 LSH
Lan1g0902 1 19815543 19819412 Lan1g2051 1 35615183 35620161 LSH