Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g2043 ATGTCAACCCAACAAGAACACCAACTTTCTCTCTCTCCTTTCAACCACTACTCCAACCGTGTTCTCCTCAAAACCCTGTTGCACCATGCAAATGATGATGGTGCAGTTGGTTTGGTTGGTCAAAGAGTTTTGGTTGGTGGGTGGGTCAAGTCTTCTAAGGAAGTTAAGAAACCTTCACTTCCTTTGATAATGGATAATAATAATAATGATGGGTTTGATGAGACAAGGAACAAGGATGTTTCATGTGTGGAAATACTTCAATCTCGTATACCATTGGTTAGGTCCATTTTTCATGTGTTGGGTGGGAAGGGTTATGTTCCTCGTAAGAAACTTGAACATTCACAACATCCTCTTAAGGCTATCATTCCTCAACCTTCTACTGTTTATCTGCTTCTTACTGATGGTTCATGTGTTTCAAGTCTTCAGGTTGTGGTTGATTCTTCAGTAGCTCAACCTAGCAATCTTTTACCTACTGGAACATGTATATTAGTAGAAGGTCAACTTGTAAAGCCATCATCAGAGGGAAAGCATTCTATTGAGCTTAAAGCTGACAAAGTTCTTCACATTGGGACAGTAGATATCGATAACTATCGGTTATCAAGGAAGCGAATTCCGCTCGATATGTTAAGAGATTACTCCCATTTTCGGCCTCGAACAACTACGGTGGCGACTGTCATGCGAATTCGCAATGTTCTGTCTTTCGCGACCCACTCGTTTTTCAATGATCATGCATTCATCGATGTCCAAGTACCTGCTATAACTTCCACCGACTCGGAAGGATTTAGCAACTTGTTCAAAGTTACTACCCTGGATCGGAAAGCAGAGAAGGAAAAGCTAAGTACCGTTTATGAGACTGAAGGTGTTAGCCTTGAAGTTGTGAAGGCAGCGGCGAAAGAGAAAAGCAACCAAGTTGAAAATTTGAAAAGAAGTGAAAGCAATAGGGAAGCACTGGCTGCCGCGATTCACGATCTGCGAAAAACAAACGAACTAGCATCACACTTGGAAGCTAGAGAAAAGAAAACAATTGAAGCTTCATTGAAGGATGACAAAGTAGACTCTTCCGAAGATTTTTTCTCCTGCCAAACTTATTTGACTGTTTCGGGCCGGTTACATCTGGCAAGTTACGCATGTGCTCTCGGAAATGTCTACTCATTTGGACCTAGATTTCAAGCTCATAAAACAGATTCTGCTAAACATGCTGCCGAAATGTGGATGGTTGAGGCTGAAATGGCTTTTGCTCAATTAAAGGACTCCATGAATTGTGCTAATGACTTTCTAAAGTACCTTTGTAAAAGGGTTTTGGAAAATTGTTCCGAAGATTTGAAATTTATTGCCAAAAGAATCGACAATGCCTGCATCGATCGTCTTCAGCAGATTGTATCAGTTTCTCCTGAAATGTTGTCCTACAATGAAGCTATAGATGTTCTAAGAAAGGTCGAAGACAAGAAATTCGAAACAAACATCGAATGGGGTATCGATCTCACTACAGAACACCTTAGCTATCTTGCTGATGTCGTATACAAGAAGCCGGTTATGATATACAATTATCCGAAAGAAGTTAGGCCGTTTTACGTTCGCTTGAATGATGACGGAAGAACTGTTGCTGCATATGATCTTATTGTCCCTAAGGTTGGAACAATAATTTCGGGTAGCCAAAACGAGGAGCGTCTTAACATAATATCATCAAGAATCAGGGAACTCGGCTTGGCGCGAGAGAAGTATGAATGGTATCTGGATCTTCGTCGAAACGGAACTGTGAAGCATTCTGGTTTCACTCTGAAGTTTGACATTATGGTGCTCTTCACAACTGGCCTTAGCAATGTTAGAGATGTTATCCCTTTCCCAAGAAGCTATGGCAAAGCCAATAATTAG 1872 0.4108 MSTQQEHQLSLSPFNHYSNRVLLKTLLHHANDDGAVGLVGQRVLVGGWVKSSKEVKKPSLPLIMDNNNNDGFDETRNKDVSCVEILQSRIPLVRSIFHVLGGKGYVPRKKLEHSQHPLKAIIPQPSTVYLLLTDGSCVSSLQVVVDSSVAQPSNLLPTGTCILVEGQLVKPSSEGKHSIELKADKVLHIGTVDIDNYRLSRKRIPLDMLRDYSHFRPRTTTVATVMRIRNVLSFATHSFFNDHAFIDVQVPAITSTDSEGFSNLFKVTTLDRKAEKEKLSTVYETEGVSLEVVKAAAKEKSNQVENLKRSESNREALAAAIHDLRKTNELASHLEAREKKTIEASLKDDKVDSSEDFFSCQTYLTVSGRLHLASYACALGNVYSFGPRFQAHKTDSAKHAAEMWMVEAEMAFAQLKDSMNCANDFLKYLCKRVLENCSEDLKFIAKRIDNACIDRLQQIVSVSPEMLSYNEAIDVLRKVEDKKFETNIEWGIDLTTEHLSYLADVVYKKPVMIYNYPKEVRPFYVRLNDDGRTVAAYDLIVPKVGTIISGSQNEERLNIISSRIRELGLAREKYEWYLDLRRNGTVKHSGFTLKFDIMVLFTTGLSNVRDVIPFPRSYGKANN* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g2043 623 Gene3D Bira Bifunctional Protein; Domain 2 199 622 IPR045864 -
Lan1g2043 623 Coils Coil 290 327 - -
Lan1g2043 623 PANTHER ASPARAGINE--TRNA LIGASE, CYTOPLASMIC 2-RELATED 16 623 - -
Lan1g2043 623 CDD EcAsnRS_like_N 128 191 - -
Lan1g2043 623 Pfam tRNA synthetases class II (D, K and N) 207 271 IPR004364 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Lan1g2043 623 Pfam tRNA synthetases class II (D, K and N) 350 616 IPR004364 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Lan1g2043 623 SUPERFAMILY Class II aaRS and biotin synthetases 206 617 IPR045864 -
Lan1g2043 623 PANTHER ASPARTYL/LYSYL-TRNA SYNTHETASE 16 623 - -
Lan1g2043 623 TIGRFAM asnS: asparagine--tRNA ligase 128 621 IPR004522 GO:0000166|GO:0004816|GO:0005524|GO:0006421
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g2043 Lan-Chr1 35546424 35550383 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g2043 K01893 - gmx:100787363 861.292