Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g2042 ATGGAGTTCATCCACAGGCGCGTGGAGCCATGGGTTCGTGGCGTGGAGCCATGGGTGCGAGGCGTTGAGCCATGGGTGAGGGACCAACGATCGAAGTTCTTCAATGTCTCGTGGGCCCCACTCCAATGGAGAATGAAGTGGCCATGGTCTAGTCATCGTGAACAGAAGAAGAGGATCCAAGAAGAGTTCCAACGTCGAAGGAAGCAGCTTCAGGATCTATGTCGCGCCCTTAGCATCGATTCCGTTTCTGATTTGCAAGATCTTCTCTGTTGCATGGTTCTCTCTGAGTGCGTTTACAAGAGACCTGCCACCGAGATGATTCGAACTGTCAATAAATTTAAGGCTGATTTTGGTGGACAAATTGTGGCCTTGGAGCGGGTACAACCATCATCAGATCATGTTCCTCATAGGTATTTGTTGGCAGAAGCAGGAGACACTTTATTTGCATCCTTTATAGGAACAAAGCAGTACAAGGATATAATTGCTGATGCAAATATACTTCAAGGTGCAATCTTTCATGAGGATGCTGTTGAGGAATCTGATGTATGTGCAGCAACTGAATCCGATCAGGTTGAAAACCAAAATGGAAAAGAATATAGATGGAACCCTCTTGAAAAAAGATTTAAACAACAGAAGAGTAAATCCAAACCTGCTGCTCATAGGGGTTTCATGGCTCGTGCTAAAGGAATACCTGCTTTGGAATTGTATAGGCTTGCCCAAAAGAAGAAACGAAAGCTTGTTTTATGTGGCCATTCACTTGGTGGAGCAGTAGCTGCGTTAGCTACTCTTGCCATTTTGAGAGTAATTGCCGCTTCATCACCAACAAGGGAAAATGAGAGAGTCTCTATCAAATGTATAACATTTTCTCAACCTCCTGTTGGAAATGCTGCTTTGAAGGACTATGTTAATAGAAAAGGTTGGCAGCATTATTTCAAGAGTTACTGCATCCCAGAGGATTTGGTTCCCCGTATTTTATCTCCTGCTTATTTTCACCATTATAGTGCTCAGCCTCAGTCAATGCTTTCTGATAATGAAAGTAACATCTTATTAGCGACAAAGCATGAGCAAGGGGTAGGGAAACCAAAAGAGAATGATGAGGAGCAATTAGTTTTGGGGGTAGGTCCTGTGCAGAGATCCTTCTGGAGACTCTCAAAGCTAGTTCCTTTAGAAGGATTACAAAGAAAATTTAGTAAACACCGAGAAAGACAAACGAGTTCTGTCGAAACAACTTCTGTGCATGATTCTCTTGCCAGCAGTTTGATTGGGGAGGAAGTAGTTGAACCGCAGTCACTTGAAATACAAGAGGGTTCTGATGGCATATCACTCAAGCCTTTACCTGACACTGGAAAACATGCATTGGAGGTGGTAACAAATGGGAAAACAGACACTAAGAGCAATACCATGACCGGAAATGAAAAAACATGGCGCAGAGTGCCTTATTTACCTTCATATGTGCCATTTGGACAGCTTTATTTATTGGGAAATTCCTCTGTAGAGTCACTATCAGGTGCAGAGTACTCAAAGTTGACATCGGTCAAATCAGTGATTGCTGAATTGAAGGAAAGATTCCAATCACATTCAATGAAATCATATCGATCTCGATTTCAGAGAATCTATGACTTGTTTATGAGCGATAATGCATCATCCTTCTTAGGGATTGAGCAATGGCAGCAGTTTCCTCATCTAGAGCAATGGCTTGGCCTTGCAGCTGAAGGGACTGTGGAGCTTGGGCATATAGTAGAGTCTCCTGTTATTCGTACTGCAACATCAATTGTTCCTCTGGGATGGAATGATGGGCCTGGAGCAAAAAATGGAGAACATCTGAAAGTTGATATTACTGGTTTTGGCTTGCATCTCTGTACACTTGTTCATGCTCAAGTGAATGGTAACTGGTGTTCAACTACAGTTGAGTCCTTTCCATCTGCACCAAACTATTCTTCAAATTATGGAATTCAGCCTGAGTTACAGAACATGAGAATATTGGTTGGTGCTCCACTAAGAAGCCCGCCAAAGCATCAAACTGTTTTAGACTCATCGATTCCTACTTTTACTTCTGTTGATTCCGAGACTGCTAGTAGTTCAGCACTTATTGACAAGGATAAGTTCACCCGTCCTGAAAGTTTAAATAACTTTCTAATATTCTGCACTAGTGATTTTACAACTGTTTCCAGAGAGGTTCATGTCAGAACTCGTAGAGTACGGTTAGTTGGGCTGCAGGGTGCTGGTAAAACCACTCTTTTAAAGGCAATCTTGAATAAATGTAAACCAAATATTGCTAACAATGAGGTTGTGGTGTCAGATGTTGATGTGCAAGAAGGTATTGCTGATGGTTTGAGTTATTGTGACTCGACAGGAATAAATATGCAGGAACTGAACATGGAAACCTCTCGCTTCAAGGATGAACTATGGCATGGAATTCGAGATCTTAGTAGGAAGACAGACTTGATTATACTTGTTCATAACCTATCTCATAGCATACCTCGATATGGCGACTCAAATGGTTCTCAACAAAAGCCAGTCCTTTCACTTTTCTTGGATGAAGCTAAATCTCTTGGAATTCCTTGGGTTCTCGCAATAACGAACAAATTTTCAGTTAGTGCACACCATCAAAATGCAGCTATCGAAGCTGTCTTGAAAGCTTATCAAGCATCTCCCAGCTCAACCGAGGTTATAAATTCCTGTCCATATGTTATGCCTGGTTTTGCTGGGGCTACTCAGTCATGGGATTCAACCAATCCAGATTCTTCTTATACAAGGATAGGTGCTCAAAGGCTTTTACTGGCACCTATTAACTTTGTTATGAGGCCTTTCCAGAAAAAAGAGATTATTCTTCCAGTAGAAGGTGTCAACTCTCTCCGTCAACAAATTCATCGTATACTTCGCAGTCATGAGGAGTCTTCATTTCAGGAACTTGCCAAAGATAGACTAATGATCGAGTTAGCGCGAGAACAAGCAATGTCAATCGATGCGAGTAAAGACGCTCAAGCTAAGGCAGTTTCGCTGAATTCTGCTGCTGTGGGTGCATCTGTTGGGGCTGGTCTTGGCATTGTCATGGCCATTGTAATGGGAGCAGCATCTGCCCTGAGGAAGCCCTAA 3096 0.4251 MEFIHRRVEPWVRGVEPWVRGVEPWVRDQRSKFFNVSWAPLQWRMKWPWSSHREQKKRIQEEFQRRRKQLQDLCRALSIDSVSDLQDLLCCMVLSECVYKRPATEMIRTVNKFKADFGGQIVALERVQPSSDHVPHRYLLAEAGDTLFASFIGTKQYKDIIADANILQGAIFHEDAVEESDVCAATESDQVENQNGKEYRWNPLEKRFKQQKSKSKPAAHRGFMARAKGIPALELYRLAQKKKRKLVLCGHSLGGAVAALATLAILRVIAASSPTRENERVSIKCITFSQPPVGNAALKDYVNRKGWQHYFKSYCIPEDLVPRILSPAYFHHYSAQPQSMLSDNESNILLATKHEQGVGKPKENDEEQLVLGVGPVQRSFWRLSKLVPLEGLQRKFSKHRERQTSSVETTSVHDSLASSLIGEEVVEPQSLEIQEGSDGISLKPLPDTGKHALEVVTNGKTDTKSNTMTGNEKTWRRVPYLPSYVPFGQLYLLGNSSVESLSGAEYSKLTSVKSVIAELKERFQSHSMKSYRSRFQRIYDLFMSDNASSFLGIEQWQQFPHLEQWLGLAAEGTVELGHIVESPVIRTATSIVPLGWNDGPGAKNGEHLKVDITGFGLHLCTLVHAQVNGNWCSTTVESFPSAPNYSSNYGIQPELQNMRILVGAPLRSPPKHQTVLDSSIPTFTSVDSETASSSALIDKDKFTRPESLNNFLIFCTSDFTTVSREVHVRTRRVRLVGLQGAGKTTLLKAILNKCKPNIANNEVVVSDVDVQEGIADGLSYCDSTGINMQELNMETSRFKDELWHGIRDLSRKTDLIILVHNLSHSIPRYGDSNGSQQKPVLSLFLDEAKSLGIPWVLAITNKFSVSAHHQNAAIEAVLKAYQASPSSTEVINSCPYVMPGFAGATQSWDSTNPDSSYTRIGAQRLLLAPINFVMRPFQKKEIILPVEGVNSLRQQIHRILRSHEESSFQELAKDRLMIELAREQAMSIDASKDAQAKAVSLNSAAVGASVGAGLGIVMAIVMGAASALRKP* 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g2042 1031 Coils Coil 53 73 - -
Lan1g2042 1031 Pfam Lipase (class 3) 210 324 IPR002921 GO:0006629
Lan1g2042 1031 Pfam 50S ribosome-binding GTPase 733 832 IPR006073 GO:0005525
Lan1g2042 1031 SUPERFAMILY alpha/beta-Hydrolases 82 333 IPR029058 -
Lan1g2042 1031 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 729 860 IPR027417 -
Lan1g2042 1031 Gene3D - 716 895 IPR027417 -
Lan1g2042 1031 Gene3D alpha/beta hydrolase 83 368 IPR029058 -
Lan1g2042 1031 PANTHER F21O3.11 PROTEIN 42 1031 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g2042 Lan-Chr1 35533015 35544646 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g2042 22 1031 Acyl Lipid Metabolism Gene Families AT3G07400 61.306 0.0 1248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g2042 - - lang:109363520 2025.37