Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g2018 ATGGCTGCTGAATCTGAAATCACTGATACCAACACACTTTCCTGTGATACCTGTGGAAAACCTGCGAGTCTTCAGTGTCCAAAATGCATGGAATTGAAGCTTCCTCGCAAAGGTTCTGCTTTCTGCACTCAGGAATGTTTCAAGTCTTCATGGAACTCGCACAAATTAGTGCATCTGAAGGCAAAGCTATCATCCTCACTTAGCGCGGGTGCTCCAGGTCAGCAGAGTTCAGACAAACTGGGTGAAAATTGGTTATACTGCTTGAAGAGAGGCCAGGCTCGGACTCCAAAGTTTCCATACTTTGATTGGACTGGGACACTGCGACCATATCCCATATCTATTAAACGGATAGTTCCAGCTCATATTGATAAACCTGATTGGGCTGATGATGGAATTCCTGTAGTTGAGCCCAATAGTGATCTCCAGCATGTTGTTGAGATCAAATCTCCAGATCTAATTCAGAGAATGAGAGAAACTTGTCGGATTGGAAGGGAGGTTTTGGACGCAGCTGCCCGGATCATTCGGCCTGGTGTGACTACTGATGAGATTGACAGAGTTGTTCATGAGGCAACAATTGCTGCCGGAGCATATCCATCACCTCTCAATTACCATTTCTTTCCCAAATCTTGCTGCACTTCTGTTAACGAAGTTATCTGCCATGGAATTCCTGATGCAAGGAAACTTGAGGATGGTGACATTGTAAATGTTGATGTCACTGTATACTATAAAGGTGTTCATGGTGATCTCAATGAGACATACTTTGTGGGTAATGTTGATGAAGAGTCTTGCCAGCTGGTCAAGTGCACGTATGAGTGCCTAGAGAAGGCGATATCTATTGTAAAACCCGGGGTACGATTTCGTGAAATTGGTGAAGTTGTTAATCGTCATGCTTTAATGTCAGGATTCTCAGTGGTTAAATCATATTGTGGTCATGGAATTGGAGAGCTCTTCCATTGTGCACCAAATATTCCTCATTATGGAAGAAATAAAGCTGTTGGTGTGATGAAAGCTGGACAGACCTTTACTATTGAACCAATGATCAATGCTGGTGTGTGGCGTGATCGAATGTGGCCGGACGGATGGACTGCTGTTACGGCAGACGGCAAACGAAGTGCTCAATTTGAGCACACTCTTTTGGTGACAGAGACTGGTGTTGAGGTTTTATCAGGGAGGTTACCAACATCACCCAATGTCTTTCCTTGGCTAAATTCATCATAA 1218 0.4401 MAAESEITDTNTLSCDTCGKPASLQCPKCMELKLPRKGSAFCTQECFKSSWNSHKLVHLKAKLSSSLSAGAPGQQSSDKLGENWLYCLKRGQARTPKFPYFDWTGTLRPYPISIKRIVPAHIDKPDWADDGIPVVEPNSDLQHVVEIKSPDLIQRMRETCRIGREVLDAAARIIRPGVTTDEIDRVVHEATIAAGAYPSPLNYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVTVYYKGVHGDLNETYFVGNVDEESCQLVKCTYECLEKAISIVKPGVRFREIGEVVNRHALMSGFSVVKSYCGHGIGELFHCAPNIPHYGRNKAVGVMKAGQTFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVTETGVEVLSGRLPTSPNVFPWLNSS* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g2018 405 Gene3D - 2 61 - -
Lan1g2018 405 PANTHER METHIONINE AMINOPEPTIDASE 1 13 397 - -
Lan1g2018 405 PANTHER METHIONINE AMINOPEPTIDASE 13 397 - -
Lan1g2018 405 CDD MetAP1 153 389 IPR002467 GO:0006508|GO:0070006
Lan1g2018 405 Hamap Methionine aminopeptidase [map]. 145 391 IPR002467 GO:0006508|GO:0070006
Lan1g2018 405 Pfam Metallopeptidase family M24 155 382 IPR000994 -
Lan1g2018 405 Pfam zf-MYND-like zinc finger, mRNA-binding 16 59 IPR031615 -
Lan1g2018 405 PRINTS Methionine aminopeptidase-1 signature 210 223 IPR001714 -
Lan1g2018 405 PRINTS Methionine aminopeptidase-1 signature 232 248 IPR001714 -
Lan1g2018 405 PRINTS Methionine aminopeptidase-1 signature 302 314 IPR001714 -
Lan1g2018 405 PRINTS Methionine aminopeptidase-1 signature 333 345 IPR001714 -
Lan1g2018 405 ProSitePatterns Methionine aminopeptidase subfamily 1 signature. 308 326 IPR002467 GO:0006508|GO:0070006
Lan1g2018 405 SUPERFAMILY Creatinase/aminopeptidase 99 390 IPR036005 -
Lan1g2018 405 Gene3D Creatinase/methionine aminopeptidase superfamily 101 401 IPR036005 -
Lan1g2018 405 TIGRFAM met_pdase_I: methionine aminopeptidase, type I 146 389 IPR002467 GO:0006508|GO:0070006
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g2018 Lan-Chr1 35325396 35334454 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g2018 K01265 - gmx:100813779 713.375