Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1935 ATGGCGTTGTTTCTGCTTTACGAATCTGCTTCTGGTTATGCCTTATTTGAGGCTCATGGTCTTGATGAAATTGGACAAAACACCGAAGCGGTTCGCAACTCCGTTTCGGATTTGAACCGCTTCGGAAAAGTTGTTAAGCTCAGATCTTTCAATCCTTTTACCTCTGCTCTTGATGCCCTTACACAATGCAATGCCATCTCTGAAGGGATATTGACTGATGAGCTTAGGACTGTTGTGGAGACTAATTTACCTAAACCGAAAGAAGGTAAGAAGGCCAAGTTTAGCTTAGGTGTAGCGGATCCTAAGATTGGTTCCCAGATATCGGAACTTACTAAAATCCCGTGCCAAAGTAATGAGTTTGTATTAGAGCTGATCCGGGGTGTGCGCCTCCATTTTGATAGGTTTGTCAGTGATCTCAAGTCAGGAGATTTGGAAAAAGCACAACTCGGTTTGGGTCATAGTTACAGCAGAGCAAAGGTTAAATTCAATGTGAACCGGGTCGACAACATGGTCATTCAAGCAATCTTCCTTCTTGATACACTTGATAAAGATATCAATTCGTTCTCTATGAGAGTCAGAGAATGGTATTCATGGCATTTTCCTGAGCTAGTGAAGATTGTTAATGATAACTATCTGTATGCCAAACTTACAAAATTTATCGAGGATAAGTCAAAGTTGACTGAAGACAAGATCTCAGACTTAACTGACATAGTTGGAGATGAAGATAAAGCAAAGGAGATTGTTGAAGCTGCCAAGGCCTCCATGGGTCAGGATTTGTCGCCGGTGGACTTGATTAATGTTCAGCAATTTGCACAGCGAGTAATGGACCTATCCGAGTATAGGCGGAAGCTGTATGATTACCTGGTTACTAAAATGAGTGACATTGCACCTAATTTGGCCTCTTTAATTGGTGAAGTTGTTGGTGCTCGTTTAATTTCCCATGCTGGTAGCCTTACAAATTTAGCTAAGTGTCCCTCTTCAACTCTTCAAATTCTTGGTGCTGAGAAGGCTTTGTTCAGGGCATTAAAAACAAAAGGAAACACTCCCAAATATGGTCTTATATTCCACTCTTCTTTTATTGGGCGAGCATCTGCCAAAAACAAGGGTCGTATGGCTCGTTATCTTGCTAACAAATGCTCAATTGCATCACGAATTGACTGCTTTTCTGAAAGAGAAAAGGGTACTACTGCTTTTGGGGAGAAACTGCGTGAGCAAGTTGAGGAGCGACTTGACTTTTATGACAAGGGAGTTGCCCCCCGTAAGAACATAGATGTCATGAGGTCTGCCATGGAAAGCGCTGATAACAAAGATACTGAGATGGAAACAGAAGAAGTGCCTCTTGAAGCATCAAGCAAGAAAGCCAAGAAGAAGAAACAAAAGGATGATGCCGTTGACAATGCAAATGGTGATGCACCAGAGGATCATAAATCCGAGAAGAAGAAAAAGAAAGAAAAGAGGAAAGTGGATCAGGAGTTGGAGCTTGATGATGGTGCCAATGAGGTTGCAAGTGAGACCAAGAAGAAGAAGAAAAAGAAGGATAAAAAGGATGATGAGTCAGAAGTAGTGGAGGCTGCTGTTGAGACTAAGAAGAAAAAGAAATCAAAAAGCAAGGATGCTAATTAG 1623 0.4165 MALFLLYESASGYALFEAHGLDEIGQNTEAVRNSVSDLNRFGKVVKLRSFNPFTSALDALTQCNAISEGILTDELRTVVETNLPKPKEGKKAKFSLGVADPKIGSQISELTKIPCQSNEFVLELIRGVRLHFDRFVSDLKSGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPELVKIVNDNYLYAKLTKFIEDKSKLTEDKISDLTDIVGDEDKAKEIVEAAKASMGQDLSPVDLINVQQFAQRVMDLSEYRRKLYDYLVTKMSDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTKGNTPKYGLIFHSSFIGRASAKNKGRMARYLANKCSIASRIDCFSEREKGTTAFGEKLREQVEERLDFYDKGVAPRKNIDVMRSAMESADNKDTEMETEEVPLEASSKKAKKKKQKDDAVDNANGDAPEDHKSEKKKKKEKRKVDQELELDDGANEVASETKKKKKKKDKKDDESEVVEAAVETKKKKKSKSKDAN* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1935 540 Pfam snoRNA binding domain, fibrillarin 177 411 IPR002687 -
Lan1g1935 540 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 1 537 IPR045056 GO:0030515|GO:0031428|GO:0032040
Lan1g1935 540 PANTHER BNACNNG34340D PROTEIN 1 537 - -
Lan1g1935 540 Gene3D Nop domain 299 425 IPR042239 -
Lan1g1935 540 Gene3D - 140 298 - -
Lan1g1935 540 ProSiteProfiles Nop domain profile. 295 415 IPR002687 -
Lan1g1935 540 SUPERFAMILY Nop domain 163 414 IPR036070 -
Lan1g1935 540 SMART NOSIC_2 170 222 IPR012976 -
Lan1g1935 540 MobiDBLite consensus disorder prediction 430 540 - -
Lan1g1935 540 Pfam NOP5NT (NUC127) domain 4 69 IPR012974 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1935 Lan-Chr1 34610751 34613837 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1935 K14564 - gmx:100794470 842.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0783 12 15047834 15050813 Lan1g1935 1 34610751 34613837 LSH
Lan1g1465 1 24669816 24672964 Lan1g1935 1 34610751 34613837 LSH