Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1505 ATGGACCAACATGAGAAAGCATTGTTGCATTCGGTAGAAAATGCTACTACTGAAGTCAATACCCTTCGTTCTCAGCTTGAGAGAGCAGAAAAAAGGTTGGAATATGCTCAGTCCGAATTGGCTTTAATTCGAGCTATAAAAACAACGAATGTTGAAACTATGGACAGAGGGACTAAAAGAAAGTTTGATGAGAAACAACACAAGGATTTGATTTCTTTGATGTGCAAGAATGCTTATCCTTACCCAGTAAACTTTCAAAAAAGCTACTATATCTCAAGTCAACATGATAAGAAATTGCGAAGTCTTGCTTTGTGTCCTGTGAATGATAAGCTTTTTGCAACAAGTGCTATGGATGGAATTGTCAACTTGTGGGAAGTAATTTCTTGGGGAGAAGAAGTGAACTTGAATAGCAGCACTAATTGTTTAACTCCAGAGCAATGTAGATGGCCAGAAGATATAGCTTGGCACCCAGATGGGGATAGAATCTTTTCTGTATACAATGCTAATAGTCTTGATTCTCAAATATCCATCATGTATTTGAGTAGAGTAGGAGAAGATCCTGAAGAGATGAATGATATAAATTTCTTAGAGCACAAGCCTCATACTAAAGGTATTATCAATAATATATCTTTCATGCCTTGGGAAAATACATGTTTTGTAACTGGTGGAAGTGACCATGTGGTTATACTATGGAGTGAGAATGGTGAAGATGATTGGAGACCAAAAACTTTGCACAAGAATCTTCATGCTGCTATGGTCATGGGAGTTTCTGGTATGCAACAGAAGCAAATTGTGTTGTCAGTTGGTAAAGATAAGAGAATTGTGGGGTATGATGTTTGTGCTGAAAGGGAAGATTTTACTCATATTATTGATAGTAGATGCTTGAGTGTTATTCCAAATCCATGTGACTACAACTTGTTCATGGTTCAAGCAGGGGCTTCTGAGAAACAGCTTCGATTATTTGATATTAGAACAAAGCAGAAAGAACTTCATACTTTTGGATGGACACAAGCAATCACTCTTGAAGCTCGTACAAATCTTATAAATCAGGCTTGGTCTCCCAATGGAATGTATATAACATCAGGTTCATCATATGAAATGATTCACATATTTGACATTAGATGTAATGGTCAAAACCCTTCTCAATCATTACAAGCTCATCAGAAAGGAATCTCCAAAGTTTCATGGCTTCAATCTCTGCCACTTCTTATTTCAATGTCATCTGATAACAACATTGGATTGCACAAGCTTGTGTAG 1257 0.3691 MDQHEKALLHSVENATTEVNTLRSQLERAEKRLEYAQSELALIRAIKTTNVETMDRGTKRKFDEKQHKDLISLMCKNAYPYPVNFQKSYYISSQHDKKLRSLALCPVNDKLFATSAMDGIVNLWEVISWGEEVNLNSSTNCLTPEQCRWPEDIAWHPDGDRIFSVYNANSLDSQISIMYLSRVGEDPEEMNDINFLEHKPHTKGIINNISFMPWENTCFVTGGSDHVVILWSENGEDDWRPKTLHKNLHAAMVMGVSGMQQKQIVLSVGKDKRIVGYDVCAEREDFTHIIDSRCLSVIPNPCDYNLFMVQAGASEKQLRLFDIRTKQKELHTFGWTQAITLEARTNLINQAWSPNGMYITSGSSYEMIHIFDIRCNGQNPSQSLQAHQKGISKVSWLQSLPLLISMSSDNNIGLHKLV* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1505 418 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 49 417 - -
Lan1g1505 418 SUPERFAMILY WD40 repeat-like 73 413 IPR036322 GO:0005515
Lan1g1505 418 Gene3D - 4 289 IPR015943 GO:0005515
Lan1g1505 418 ProSiteProfiles Trp-Asp (WD) repeats profile. 92 126 IPR001680 GO:0005515
Lan1g1505 418 SMART WD40_4 377 416 IPR001680 GO:0005515
Lan1g1505 418 SMART WD40_4 191 232 IPR001680 GO:0005515
Lan1g1505 418 SMART WD40_4 84 125 IPR001680 GO:0005515
Lan1g1505 418 SMART WD40_4 334 372 IPR001680 GO:0005515
Lan1g1505 418 SMART WD40_4 237 278 IPR001680 GO:0005515
Lan1g1505 418 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 49 417 - -
Lan1g1505 418 Gene3D - 290 418 IPR015943 GO:0005515
Lan1g1505 418 Coils Coil 12 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1505 Lan-Chr1 25424254 25427552 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1505 - - lang:109326912 859.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1505 1 25424254 25427552 Lan1g1505 1 25424254 25427552 ECH
Lan1g1505 1 25424254 25427552 Lan14g0380 14 8267239 8273912 PCT
Lan14g0380 14 8267239 8273912 Lan1g1505 1 25424254 25427552 PCT