Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1485 ATGCCGGAAGAGGATTTGGTGGAAATAAAATTCAGATTGTACGATGGTTCCGATATTGGACCCTTTAGGTACTCTTCCACATCTACTGTTGATGTGCTTAAGCAAAGGATTGTTTCTGATTGGCCTAAAGGTAAAACTGTCATCCCAAAGGCAGCAAATGAAGTGAAATTGATTAGTTCTGGTAAAATCTTGGAAAACAACAAGACTGTTGGTCAGTGTAAAGGACCACTTGGTGACATTGGAGGGGGAGTATTAGTAATGCATGTTGTTGTACAGCCATCTCTTGCAAAAACAAAAGAAAAGAAGATTGACAATTCACCTAAGAAGGTTATCTGCTCTTGTTCCATATTGTGA 354 0.3898 MPEEDLVEIKFRLYDGSDIGPFRYSSTSTVDVLKQRIVSDWPKGKTVIPKAANEVKLISSGKILENNKTVGQCKGPLGDIGGGVLVMHVVVQPSLAKTKEKKIDNSPKKVICSCSIL* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1485 117 Gene3D - 1 100 - -
Lan1g1485 117 PANTHER MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 3 1 117 - -
Lan1g1485 117 PIRSF MUB 1 117 IPR017000 -
Lan1g1485 117 ProSiteProfiles Ubiquitin domain profile. 7 73 IPR000626 GO:0005515
Lan1g1485 117 SUPERFAMILY Ubiquitin-like 2 98 IPR029071 -
Lan1g1485 117 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 117 IPR040015 -
Lan1g1485 117 CDD Ubl_MUBs_plant 6 93 - -
Lan1g1485 117 Pfam Ubiquitin-2 like Rad60 SUMO-like 6 115 IPR039540 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1485 Lan-Chr1 24930901 24933617 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1485 - - tcc:18605159 209.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1485 1 24930901 24933617 Lan1g1485 1 24930901 24933617 ECH