Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1476 ATGGACGTCGACGGCGAGGAGTTGACGGCGCAGGAAACCGCTTTGTATGATCGTCAGATTCGTGTTTGGGGTGCTGATGCTCAAAGAAGACTTAGTAAAGCTCATGTCCTAGTTTATGGAATGAAAGGAACTGTAGCTGAGTTTTGCAAGAACATTGTTCTAGCCGGAGTAGGTAGTCTGACTTTAATAGATGATCGAGTGGCCACTGAGGAAGCATTTTCCTCAAACTTTCTCATTCCGTCTGATGAGAATGTATATGGTGGCAAGACACTTGCTCAGCTTTGTTGTGATTCACTTAAAGACTTCAATCCTATGGTCCGTGTCTCTGTTGAAAAAGGTGATATTTCAAGCTTTGATGTTGAATTCTTCAACAAGTTTGATGTTGTCGTCGTCAGTTGTTGCTCACTTTCAGCCAAAAAACTGGTTAACGAGAAATGCCGGAAGCTATCGAAACGTGTAGCATTTTATACCGTTGATTGTAGGGATTCTTGTGGTGAAATCTTTGCTGATCTGCAGGACTACAAATATTCAAAGAAAAAACTGGATGAAACTATTGAGTGCCATCTACAGTATCCTACTTTTGTGGAAGCGATATCAATACCTTGGAAGGCACTTCACCGCAGAATGTCAAAGCTGTACTTTGCTATGAGAGTAATAGAAAAGTATGAAGAGTCTGAAGGACGAAGTGCAGGAGAAGTTTCCATAGCAGATCTTCCTGGTGTTCTCAAGCTGAAAAAGGAGCTTTGCACTGCACAATCTCTAAATGAATCTCATGTGCCTGATACTCTTCTAGAAAGATTGGTCACAAATACAACCGAGTTTCCGCCAGTCTGTGCCATTATTGGGGGAATCCTCGGACAGGAGGTTATCAAAGCTATATCTGGGAAAGGTGACCCACTAAAAAATTTCTTCTTTTTTGATGCTTTTGATGGGAAGGGCATTATAGAAGATATCTCAGATTCTAATGCCGGAAGAGAACCTTTTCAAGAAGAGCGTAGAGAACTAGTAAAATTCTAA 1017 0.413 MDVDGEELTAQETALYDRQIRVWGADAQRRLSKAHVLVYGMKGTVAEFCKNIVLAGVGSLTLIDDRVATEEAFSSNFLIPSDENVYGGKTLAQLCCDSLKDFNPMVRVSVEKGDISSFDVEFFNKFDVVVVSCCSLSAKKLVNEKCRKLSKRVAFYTVDCRDSCGEIFADLQDYKYSKKKLDETIECHLQYPTFVEAISIPWKALHRRMSKLYFAMRVIEKYEESEGRSAGEVSIADLPGVLKLKKELCTAQSLNESHVPDTLLERLVTNTTEFPPVCAIIGGILGQEVIKAISGKGDPLKNFFFFDAFDGKGIIEDISDSNAGREPFQEERRELVKF* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1476 338 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 10 317 IPR035985 GO:0008641
Lan1g1476 338 CDD Aos1_SUMO 13 316 - -
Lan1g1476 338 Gene3D - 2 321 - -
Lan1g1476 338 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 6 321 IPR045886 -
Lan1g1476 338 PANTHER SUMO-ACTIVATING ENZYME SUBUNIT 1B-1-LIKE 6 321 - -
Lan1g1476 338 Pfam ThiF family 16 310 IPR000594 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1476 Lan-Chr1 24766246 24785431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1476 189 308 EF-hand Containing Proteins AT2G30110 30.469 5.09e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1476 K10684 - gmx:100809607 582.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1476 1 24766246 24785431 Lan1g1476 1 24766246 24785431 ECH
Lan12g0764 12 14899470 14902911 Lan1g1476 1 24766246 24785431 LSH