Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1439 ATGCAAGACTCAGTTGTGATTCCTGCTTGCTTTTCTTCTACAGATAAGTTAAGTGATGAGCATGGAGCAGTGACACGTTTAGGTCAAAGTGTTTACATGTCAGTGTATAGAACAAAGATTGCTGATCACTGCCGTTTGATCACGATCACATGGTGCAAAAACTTGTTGCTTCATGGTTTATCAATATCAGTGGAAGGCTCAGAAGGAGAGACACAATACACTTGCAAGGTTGAGCTAAAGCCATGGTACTTTTGGAGGAAACAAGGTTCTAAAAGGTTTGTAGTAGATGGAAAAGCTCTTGACATATTCTGGGACCTTAAGGGTGCAAAGTTTAATGGTGAAACTGAACCAAGCTCGGAGTACTATGTAGCAGTGGTTTGTGATGAAGAGGTTGTGCTACTTCTTGGTGATCTAAAAAAAGAAGCTTACAGAAGAACTGGTTGTAGACCAGCACTTATTGATCCTATTTTGGTTTCAAAGAAAGAGCATATTTTTGGTAAGAAGAAGTTTTCAACTAGAGCTAAGTTTCATGAGAAAGGGAGTTGGCATGAGATCTCAATTGAATGCAAGATTAACAAATGGAACAATGGTGGTGATTTTCATCTTGCAAGTGGTGTGCAGCCAGAGATGGAGATAAAGATTGATGGGCACTTAGTGATTCATGTGAAGCACTTGCAGTGGAAATTTAGAGGCAATGAGTCAATTCATCTCAGAAAAATGAGAGTTGAGGTATATTGGGATGTTCATGATTGGCTCTTTAGTCCTGGTTTAAAACATGCTTTATTCATTTTTAAGCCTAATTTATCATATGCACCATCTATGTCATCATTATCATCGTCATCATCATCCTCATCACCTTCATTATTATCAACTCAAGCAACAAAGAACTTTTCTGAGTCAGTGGAGGGTTTTAGTATTAGTGGTTCATCAGAGTTTTGCTTGTTTCTCCATGCTTGGAAAGTTGAATGA 969 0.3839 MQDSVVIPACFSSTDKLSDEHGAVTRLGQSVYMSVYRTKIADHCRLITITWCKNLLLHGLSISVEGSEGETQYTCKVELKPWYFWRKQGSKRFVVDGKALDIFWDLKGAKFNGETEPSSEYYVAVVCDEEVVLLLGDLKKEAYRRTGCRPALIDPILVSKKEHIFGKKKFSTRAKFHEKGSWHEISIECKINKWNNGGDFHLASGVQPEMEIKIDGHLVIHVKHLQWKFRGNESIHLRKMRVEVYWDVHDWLFSPGLKHALFIFKPNLSYAPSMSSLSSSSSSSSPSLLSTQATKNFSESVEGFSISGSSEFCLFLHAWKVE* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1439 322 PANTHER EXPRESSED PROTEIN 1 322 IPR008586 -
Lan1g1439 322 Pfam Plant protein of unknown function (DUF868) 29 320 IPR008586 -
Lan1g1439 322 PANTHER OS01G0909400 PROTEIN 1 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1439 Lan-Chr1 24273864 24275014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1439 8 322 EF-hand Containing Proteins AT5G28150 36.050 1.12e-66 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1439 - - gmx:100779755 532.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1439 1 24273864 24275014 Lan1g1439 1 24273864 24275014 ECH
Lan12g0808 12 15233281 15234715 Lan1g1439 1 24273864 24275014 LSH