Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1432 ATGGGTATGGGTGACGAGAGTGGTATTGCACTACCATCTCCTGGTGAAGACGCTAAGAAACGAAGGGTGACTTACTTCTACGAACCCACCATCGGCGATTATTACTACGGCCAAGGCCACCCTATGAAGCCTCACCGTATCCGCATGGCCCACAACCTCATTGTACACTATTCCCTCCACCGCCACATGGAAATCAACCGCCCCTTCCTCGCCGGACCTGACGACATCCGCCACTTCCATTCCCCCGATTACGTCGATTTCCTCGCTTCCGTCTCGCCTGAGACTCTCTCTGAGGCTGCGTTCTCTCGACAGCTCAAACGTTTCAACGTCGGCGAGGATTGTCCGGTGTTTGACGGCCTTTTTAACTTCTGTCAGGCCTCTTCTGGAGGATCGATTGGCGCCGCCGTTAAACTTAATCGTGGAGACGCTGATATCGCTATTAATTGGGCTGGTGGCTTGCACCATGCCAAGAAGGCTGAAGCTTCTGGATTTTGTTATGTTAATGACATTGTTCTCGGTATTCTCGAGCTTCTCAAGGCTCATCGGCGCGTGCTGTATGTTGATATTGATGTTCACCATGGTGATGGTGTTGAGGAGGCCTTTTACACTACTGATAGAGTGATGACTGTGTCTTTTCATAAGTTTGGGGACTTTTTCCCTGGCACTGGACACATCAGAGACATTGGAGTGGGTCCCGGAAAGAATTATGCTGTCAATGTTCCATTAAATGATGGACTGGATGATGACAGTTTCCAGGGTTTGTTTCGAACCATCATTCAAAAAGTCATGGAGGTTTATCAGCCTGATGCAGTTGTTCTTCAATGTGGAGCTGATTCATTGTCCGGTGACAGATTAGGTTGCTTCAACTTAACTGTCAAAGGTCATGCAGATTGCCTTCGTTTCCTTAGATCTTTCAATGTTCCTCTGATGGTTTTGGGTGGAGGAGGATATACGATTCGGAATGTTGCTCGTTGTTGGTGTTATGAGACGGCAGTGGCAGTAGGAGTGGAGCCTGATAATAAGTTGCCTTATAATGAATATTATGAGTATTTTGGCCCAGATTATACTCTTCATGTCGATCCAAGCAAGATGGACAACCTAAACACACCCAAGGATATGGAAAAAATAAGGGACATGCTGCTAGAACAGATTTCCAGACTTCCCCATGCTCCCAGTGTGTCGTTTAGCACAACACCATCAGGCATCCCAGTTCCAGAAGAGGTGGAAGAGAACATGGATAGGAGAACAAAACCTCGCATATGGAGCGGTGACGATTGTGATTCTGATCGCGAAGATGAAAAGGCTGAGTCAAAGTGTTCAAACATAAATACCAATATGCGGGACTCTGCAGATGACATGGAAGAAGATAAGCCAGATGGGCATTGCTGCTGA 1392 0.4727 MGMGDESGIALPSPGEDAKKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYSLHRHMEINRPFLAGPDDIRHFHSPDYVDFLASVSPETLSEAAFSRQLKRFNVGEDCPVFDGLFNFCQASSGGSIGAAVKLNRGDADIAINWAGGLHHAKKAEASGFCYVNDIVLGILELLKAHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDIGVGPGKNYAVNVPLNDGLDDDSFQGLFRTIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLTVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVDPSKMDNLNTPKDMEKIRDMLLEQISRLPHAPSVSFSTTPSGIPVPEEVEENMDRRTKPRIWSGDDCDSDREDEKAESKCSNINTNMRDSADDMEEDKPDGHCC* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1432 463 MobiDBLite consensus disorder prediction 448 463 - -
Lan1g1432 463 PIRSF HDAC_I_euk 7 461 IPR003084 GO:0004407|GO:0016575
Lan1g1432 463 PANTHER HISTONE DEACETYLASE 6 7 438 - -
Lan1g1432 463 PRINTS Histone deacetylase signature 42 59 IPR003084 GO:0004407|GO:0016575
Lan1g1432 463 PRINTS Histone deacetylase signature 75 93 IPR003084 GO:0004407|GO:0016575
Lan1g1432 463 PRINTS Histone deacetylase signature 108 125 IPR003084 GO:0004407|GO:0016575
Lan1g1432 463 PRINTS Histone deacetylase signature 129 149 IPR003084 GO:0004407|GO:0016575
Lan1g1432 463 PRINTS Histone deacetylase signature 170 186 IPR003084 GO:0004407|GO:0016575
Lan1g1432 463 PRINTS Histone deacetylase signature 229 242 IPR003084 GO:0004407|GO:0016575
Lan1g1432 463 PRINTS Histone deacetylase signature 246 264 IPR003084 GO:0004407|GO:0016575
Lan1g1432 463 PANTHER HISTONE DEACETYLASE 7 438 - -
Lan1g1432 463 Pfam Histone deacetylase domain 40 331 IPR023801 -
Lan1g1432 463 CDD HDAC_classI 26 333 - -
Lan1g1432 463 Gene3D Histone deacetylase domain 19 394 IPR037138 -
Lan1g1432 463 SUPERFAMILY Arginase/deacetylase 21 386 IPR023696 -
Lan1g1432 463 PRINTS Histone deacetylase superfamily signature 151 174 IPR000286 -
Lan1g1432 463 PRINTS Histone deacetylase superfamily signature 183 198 IPR000286 -
Lan1g1432 463 PRINTS Histone deacetylase superfamily signature 268 278 IPR000286 -
Lan1g1432 463 MobiDBLite consensus disorder prediction 407 438 - -
Lan1g1432 463 MobiDBLite consensus disorder prediction 392 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1432 Lan-Chr1 24142022 24148246 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1432 K06067 - gmx:100819221 815.839
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1432 1 24142022 24148246 Lan1g1432 1 24142022 24148246 ECH