Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1428 ATGAAACTTACCATCTTCCTCTTCTCCGTGTCTCTAACCTTAACTCCCCATAAACAAATGGTTCTCCTTCACCCTAATTCCCCATTCTCAATCAAACTTGAAGCTTCAACTTTCTTAGCAAATGACCATCATATCCTCACTCAAATCCCACCCAACATAACCGCCACACCTCCACCCCATGACCCTTCAAACACCGCCGGTTGTTTCATCGGTTTTCATGCCACCGCGCCAAGTAGCCGCCAAGTGGTTCCCATAGGCAAGCTTAGGGGAATAAGGTTCATGAGTATTTTCAGATTCAAACTATGGTGGAGTACTCATTGGAATGGAAGCAATGGCCGTGATGTTGAGAATGAAACACAGTTTATGATGTTGGAGAACAATTCCAGCATAGGACGCCCCTATGTTCTTCTTCTGCCACTCATTGAAGGTGGTTTCAGAGGTTGTCTCCAACATGGGCTTGATGACTATGTGGATATTTGCATGGAAAGTGGGTCCACTCGTGTCATTGAGTCTAACTTCAGAAGCTGTTTGTATATTCATGTCGATGATGATCCTTATAGTTTAATGAAGGAAGCAATGAAAGTGATGAAGGAACATCTTGGAACATTCAAGCTTCTAGAAGAGAAAACCCCACCTGGTATTGTGGACAAGTTTGGGTGGTGCACCTGGGATGCATTTTACCTAAAGGTGAATCCACAAGGAGTATGGGAAGGGGTGAATGGCCTAGTAGAGGGTGGGTGCCCTCCAGGTTTAGTCATCATTGATGATGGTTGGCAAACTTTTTGTCGCGATGATGAACCAGTGACAGATGGAGGAAGCTTGAATTGCTCTATACCTGGTGAACAAATGCTGAATAGGCTCACAAAGTTTGAAGAGAATTGTAAGTTCAGGGAGTACAAATCTCAAAGGGTACCTAATAACAAAGGGATGGGTGCCTTTGTTAGGGACCTTAAGGATGAGTTTAAGTCCTTGAAGTATGTGTATGTGTGGCATGCTTATTTGGGGTATTGGGGTGGGATAAGGCCTAATGTGGTAGGGATGCCTCAGTCCAAGATCATTGATCTTAAGGTTTCTGAAGGGGCGGAAAAGATGATGGTTGATTTAGCAGTGGTGAAGGTAATAGAGAGTAGGGTGGGATTGGTGGCACCTGAAGAGTTATATGAGGGACTTCACTCACACCTTGAATCGGTTGGAATTGATGGTGTCAAGATTGATGTCACAAATATTCTTGAGATGATATCAGAGGAATATGGTGGCCGTGTTGAACTCGCAAAAGCATATTTCAAAGCACTCACTGCTTCAGTTAGGAAACATTTCAAAGGCAACGGGGTCATTGCTAGCATGCAGCAGAGCAATGAGTTCATGTTCCTTGGTACAGAAACCATATCACTAGGACGAGTTGGTGATGATTTTTGGTCTAAGGACCCTGCTGGAGATCCAACAGGAACATATTGGCTGCAAGGATGTCACATGGTGCATTGTGCATACAACAGCTTGTGGATTGGAAATTTTATTCACCCTGATTGGGACATGTTCGAAACTAATCATGTTTGTGCCGAATTCCATGCCGCTTCTCGAGCCATCTCTGGTGGACCAATTTATATCAGTGACTCTATTGGAAACCACAACTTCAAGTTGCTTAAGATGCTGGTTCTACCTGATGGCTCCATTTTGAGGTGTCAACATTATGCACTTCCTACCAGAGATTGCTTATTTGAAGACCCTTTGCATGATGGGAAAACAATGCTCAAAATTTGGAACCTCAACAAATATACAGGGGTTTTGGGTCTGTTCAACTGCCAAGGAGGAGGGTGGTGCCCTGAATCTCGGCGAAACAAGAGTGCCCCGGATTGTTCAAACACTGTGACTTGCTTTGCAAGTCCTAAGGACATAGAATGGAGCAAAGGGAAGGAACCAATATGCATCAAAGAAGTAGCTTTATTTGCTGTTTACACATTTAAGGATGACAAGTTGAAGTTCCTCAAGTGGGAAGAGAGTTTAGAGTTTTCACTTGCACCTTTTAGTTTTGAACTTATGAATGTTTCTCCAGTGCTGGCCTTACCCAAAAAAGCAGTCCAATTTGCTCCAATTGGATTAGTAAACATGCTCAACTCTGGAGGCTCAATTCAGTCTTTAGAATTTGATGAGCATGAAAATGTGGCTAGAATTGGGTTGAGAGGACATGGAGAAATGAGGGTATTTGCATCTGAGAGGCCACAAACTTGCAAGATTGATGAAGTACATGTGGAATTTGATTATGAAGACAACATGGTTAGGGTCCATGTTCCTTGGCCTAACTCTTCAAGATTGTCCATGGTGGAGTATTTGTTTTGA 2334 0.4327 MKLTIFLFSVSLTLTPHKQMVLLHPNSPFSIKLEASTFLANDHHILTQIPPNITATPPPHDPSNTAGCFIGFHATAPSSRQVVPIGKLRGIRFMSIFRFKLWWSTHWNGSNGRDVENETQFMMLENNSSIGRPYVLLLPLIEGGFRGCLQHGLDDYVDICMESGSTRVIESNFRSCLYIHVDDDPYSLMKEAMKVMKEHLGTFKLLEEKTPPGIVDKFGWCTWDAFYLKVNPQGVWEGVNGLVEGGCPPGLVIIDDGWQTFCRDDEPVTDGGSLNCSIPGEQMLNRLTKFEENCKFREYKSQRVPNNKGMGAFVRDLKDEFKSLKYVYVWHAYLGYWGGIRPNVVGMPQSKIIDLKVSEGAEKMMVDLAVVKVIESRVGLVAPEELYEGLHSHLESVGIDGVKIDVTNILEMISEEYGGRVELAKAYFKALTASVRKHFKGNGVIASMQQSNEFMFLGTETISLGRVGDDFWSKDPAGDPTGTYWLQGCHMVHCAYNSLWIGNFIHPDWDMFETNHVCAEFHAASRAISGGPIYISDSIGNHNFKLLKMLVLPDGSILRCQHYALPTRDCLFEDPLHDGKTMLKIWNLNKYTGVLGLFNCQGGGWCPESRRNKSAPDCSNTVTCFASPKDIEWSKGKEPICIKEVALFAVYTFKDDKLKFLKWEESLEFSLAPFSFELMNVSPVLALPKKAVQFAPIGLVNMLNSGGSIQSLEFDEHENVARIGLRGHGEMRVFASERPQTCKIDEVHVEFDYEDNMVRVHVPWPNSSRLSMVEYLF* 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1428 777 Pfam Raffinose synthase or seed imbibition protein Sip1 34 760 IPR008811 -
Lan1g1428 777 Gene3D Aldolase class I 215 553 IPR013785 -
Lan1g1428 777 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE-RELATED 9 777 - -
Lan1g1428 777 SUPERFAMILY (Trans)glycosidases 212 559 IPR017853 -
Lan1g1428 777 PANTHER - 9 777 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1428 Lan-Chr1 24078215 24082385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1428 32 777 Glycoside Hydrolase AT5G40390 60.602 0.0 957
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1428 K06617 - gmx:100798883 1221.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1428 1 24078215 24082385 Lan1g1428 1 24078215 24082385 ECH