Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1411 ATGGACCGACATAATAACCGTTCCGTTAACCGATCGTCTAAGAAGTCCGTTAACTATCACGTTTACGGTGACGTTGATGGTGACGCTACTTCTGATTCCGAGAGCTGCGCTTCTAGCGGCGGCGGAGAAATTGTCAGCACTGTGCAGCCGCGGCGCACGGTGTTTGACGAAAGGTTCGCTAAAATGGAGGAAGGTGAGAAGGTTAGCAATGTTATGGAGAGCAAATTCGTTCGGTGGTTGGAATCGCTCGGGGTGAAACCTGAGGTGGATGTGGTTCGTAGGAACATTCGTTCAAACGTGATGCTGCAGGCGAAGGTTCAATGCTTCCAGATTTTCATGCGTGCGATGGCGAAATTGCGCGAGGGAGATCCTAACGTTAAGTATGCTTGGTATGGAGCTTCGAGTAAGGGAGAGATTGATGATATTGTTGAACACGGTTTCGGTGGGAAGAATCTGAATAATGGACTGCGTCTATCTCCAGAGGATTCTCCTCTCGAAAGTGTGAAAAGGAGTGTTGCTGACAAACACGGTCTGAGGCACATGTTGTTGTGTCGCGTTATACTAGGGAGGACAGAGCTAGTGCAATCTGGTTCTGATCAATGGGGTCCGAGTTCTGAAGAGTTTGATTCCGGTGTGATAGAGAGTGTTTCAGCTCCAAAGGAGTATGTTGTTTGGTGCAGCAAGATCAACACTCATGTTTTGCCTGAGTTTGTCTTAAGTTTCAAGCTTCCTTCATCTTTATCCGCAGGGCGTGTGAGGATTGAACAACCATTGAGACCAACTTCGCCTTGGATGCCATTCCCAGCTCTAATTGCTTTGCTTTCCAGGACTTTGCCTTCACCTGATATTATCATGATCAACAAGTACCACAAAGATTATGCCGAAAAAAAGATTTCACGACAGGAGCTGATACAAAAAGTGAGAGTAATAGCGGGGGACACATTGCTGGCTTCGATCATCAAAACTTTCAGAGCCAGGAAAATACCTGCAAGCCTTGAAGCCAATAAGGTCAAAGAATGGCAACTGGCCAGGCCGCAACGGGGTGGAATGAAGTCCTTCACATGA 1065 0.4723 MDRHNNRSVNRSSKKSVNYHVYGDVDGDATSDSESCASSGGGEIVSTVQPRRTVFDERFAKMEEGEKVSNVMESKFVRWLESLGVKPEVDVVRRNIRSNVMLQAKVQCFQIFMRAMAKLREGDPNVKYAWYGASSKGEIDDIVEHGFGGKNLNNGLRLSPEDSPLESVKRSVADKHGLRHMLLCRVILGRTELVQSGSDQWGPSSEEFDSGVIESVSAPKEYVVWCSKINTHVLPEFVLSFKLPSSLSAGRVRIEQPLRPTSPWMPFPALIALLSRTLPSPDIIMINKYHKDYAEKKISRQELIQKVRVIAGDTLLASIIKTFRARKIPASLEANKVKEWQLARPQRGGMKSFT* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1411 354 SUPERFAMILY ADP-ribosylation 106 243 - -
Lan1g1411 354 Gene3D - 58 243 - -
Lan1g1411 354 ProSiteProfiles RST domain profile. 258 329 IPR022003 -
Lan1g1411 354 ProSiteProfiles PARP catalytic domain profile. 53 262 IPR012317 GO:0003950
Lan1g1411 354 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 24 335 IPR044964 -
Lan1g1411 354 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4 24 335 - -
Lan1g1411 354 Pfam RCD1-SRO-TAF4 (RST) plant domain 259 324 IPR022003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1411 Lan-Chr1 23842951 23845891 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1411 - - adu:107491749 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1411 1 23842951 23845891 Lan1g1411 1 23842951 23845891 ECH