Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1080 ATGCAGCTACTTAGTGCGAAATTGAGTGAAACATTCTTCCATAGAAAAGCTTCAATTAACCGCTTCCGATCATCACTATCTCAAACTTCTACTACTACTCCTCCTTCACTTCAATTTCAATTTCAACTCCGTTTTCATCGACACCTATCATCTTCTTCCGATGAACATTTTCCGAGTGGTGAATTTGAATTTAAGCCTATTACTGGTTGGAATAAATTTCTTGTGAAACTTAAGATGCTAATTGCTTTCCCTCGTATTCGTCATGATACTGTTTATACCTTCAAATTGCGCGGCCAGATATCAGATCAATTGAATAGTAGGTTCAGTAGAGGATTATCTCTACCTCAGATTTGTGATAATTTCATCAAAGCTGCTTATGATCCTCGTATTTCTGCTATTTATCTTCATATTGATTCCTTAAGTTGTGGCTGGGGTAAACTCGATGAAATTCGAAGGCATATCCTCGATTTCAAAAAATCAGGAAAAATCGTTGTGGCTTATGTCCCTTCATGTCGAGAAAAAGAATATTACCTTGCATGTGCATGTGACGAGATATATGCCCCTCCAAGTGCTTATTTTTCTTTGTTTGGATTAACTGTTCAAGCTTCGTTTGTAAGAGGTATTTTAGATAACATAGGAATTGAACCACAAGTGGAAAGGGTTGGCAAATACAAAAGTGCAGGAGATCAACTAACCTGTAGAACCATGTCTGATGAAAATTGTGAGATGTTAACTGCATTGCTAGAAAATATCTATACAAATTGGCTGGATAAAGTCTCTTCTGCTAAAGGAAAGAAAAAAGAAAATATTGAGAACTTCATAAATGAAGGTGTCTATCAAGTAGACAGGCTTAAAGAAGAAGGCTTCATATCAGACATAATTTATGATGATGAGGTTATCACCAGATTGAAGGAGAGACTTGGAGTGAAAGCAAATAAAAATCTGCCTATGGTTGATTACAGAAAATACTCTAGAGTTAGGAAATGGACTCTTGGAATATCAGGCGGTAAAGAACTGATAGCCATCATCCGTGCCTCAGGGATCATTCGTCGTGTCGAGAGTCCATTAAGTGCTTCTAGGTCTGGTATCATTGGAGAGAAGTTCATTGAGAAGATTCGCAGTGTTAGAGAGTCAAAAAAAATTAAGGCTGCAATTATCCGAATTGACAGCCCTGGAGGTGATGCTCTTGCTTCTGATTTGATGTGGAGAGAAATCAGGCTTCTGGCTGCTTCAAAACCAGTCGTTGCTTCAATGTCTGATGTTGCAGCAAGTGGAGGATACTACATGGCAATGGGAACAGGAACAATTGTGGCCGAAAGTCTTACCTTAACTGGTTCAATTGGAGTGGTCACAGGAAAGTTTAACCTGGGGAAACTTTACGAGAAGATTGGCTTCAAAAAAGAAATCATATCAAGGGGCAAATACGCTGAGCTCCTTGCAGCTGAGCAGCGTTCTTTTAGGCCAGATGAAGCAGAATTATTTGCCAAGTCTGCACAGCATGTTTATAAACAATTTCGAGATAAGGCCGCCTTTTCCAGATCAATGACTGTAGACAAGATGGAAGAAGTTGCACAGGGAAGGGTATGGACTGGTAAGGATGCAGCTTCACACGGTTTGGTTGATGCCATTGGTGGGCTCTCTCGAGCTATCGCCATTGCAAAATTGAAGGCCAATATACCTAAAGATAAACAGGTTACTATTGTGGAACTCTCAAGACCCAACCTTTCTATACCAGAGTTTATAAGTGGTGTAGGTAATTCTCTTGTTGGAGTAGACAGAACAATAAAGGAACTGCTAGAGGACTTCACATTATCTAATGGAGTTCAAGCACGGATGGACGGAATCGTGTTTCAGAAATTGGAAGGACACCCAGGTTGCAACCCTATTTTGGCATTGGTAAAAGATTACCTCACTTCCCATTAG 1923 0.3973 MQLLSAKLSETFFHRKASINRFRSSLSQTSTTTPPSLQFQFQLRFHRHLSSSSDEHFPSGEFEFKPITGWNKFLVKLKMLIAFPRIRHDTVYTFKLRGQISDQLNSRFSRGLSLPQICDNFIKAAYDPRISAIYLHIDSLSCGWGKLDEIRRHILDFKKSGKIVVAYVPSCREKEYYLACACDEIYAPPSAYFSLFGLTVQASFVRGILDNIGIEPQVERVGKYKSAGDQLTCRTMSDENCEMLTALLENIYTNWLDKVSSAKGKKKENIENFINEGVYQVDRLKEEGFISDIIYDDEVITRLKERLGVKANKNLPMVDYRKYSRVRKWTLGISGGKELIAIIRASGIIRRVESPLSASRSGIIGEKFIEKIRSVRESKKIKAAIIRIDSPGGDALASDLMWREIRLLAASKPVVASMSDVAASGGYYMAMGTGTIVAESLTLTGSIGVVTGKFNLGKLYEKIGFKKEIISRGKYAELLAAEQRSFRPDEAELFAKSAQHVYKQFRDKAAFSRSMTVDKMEEVAQGRVWTGKDAASHGLVDAIGGLSRAIAIAKLKANIPKDKQVTIVELSRPNLSIPEFISGVGNSLVGVDRTIKELLEDFTLSNGVQARMDGIVFQKLEGHPGCNPILALVKDYLTSH* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1080 640 TIGRFAM SppA_dom: signal peptide peptidase SppA, 36K type 340 553 IPR004635 GO:0006508|GO:0008233
Lan1g1080 640 PIRSF Protease_4_SppA 36 640 IPR004634 GO:0006465|GO:0008233|GO:0016021
Lan1g1080 640 SUPERFAMILY ClpP/crotonase 340 545 IPR029045 -
Lan1g1080 640 PANTHER PROTEASE 4 51 639 - -
Lan1g1080 640 CDD S49_Sppa_N_C 340 554 IPR002142 GO:0006508|GO:0008233
Lan1g1080 640 CDD S49_SppA_67K_type 93 305 - -
Lan1g1080 640 Gene3D - 336 483 - -
Lan1g1080 640 Pfam Peptidase family S49 157 309 IPR002142 GO:0006508|GO:0008233
Lan1g1080 640 Pfam Peptidase family S49 408 558 IPR002142 GO:0006508|GO:0008233
Lan1g1080 640 Gene3D - 484 608 - -
Lan1g1080 640 Gene3D - 230 325 - -
Lan1g1080 640 Gene3D - 90 229 - -
Lan1g1080 640 SUPERFAMILY ClpP/crotonase 75 295 IPR029045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1080 Lan-Chr1 20939408 20947385 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1080 K04773 - gmx:100809623 962.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1080 1 20939408 20947385 Lan1g1080 1 20939408 20947385 ECH