Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1059 ATGGCTTCTGTGGTTACGAACAATGGTAACGAAGTCAACGGTCAACGACGTGTTGGTTTAATCTACAATGACAGAATGTGCGACCATTTCAGTTTACAAGATCATCATCATCCCGAAGCCCCTGATCGAATCAGAGTCATATGGAACAAGCTTAACAAAACTGGTATCTGCGATCGATGTGTGATTTTGGATGCCAAAGAAGCTGAAGACAAATACATACAGTTGGTGCACTCCAAAAGTCATGTAAATCAGATTAAGCACATCAGCACAAAACAATACGATTCTCGAAGGCATAAGATTGCGTTAAAACTGAATTCTATATATTTTAATGAAGGTTCATCAAAAGCTGCTTATCTTGCTGCTGGCTCTGCTGTTGAGGTTGTTGAACAAGTGGCAAGCAGGCAATTGCATTCTGCTGTTGCTATTGTGAGGCCTCCAGGTCATCATGCTGAACATAATGAAGCCATGGGATTCTGTCTATTCAACAATGTTGCAATATCTGCTTCTTATCTCTTAGATGAAAGACCAGAATTAGGTATCAAGAAAATTTTAATTGTTGATTGGGATGTCCATCATGGAAATGGTACTCAAAAAACGTTCTGGAATGATTCTCGTGTCTTATTCTTCTCTGTTCACAGGCATGAATTCGGAACTTTTTATCCGTGTGGTGATGATGGCTTTTATACCATGGTTGGAGAAGGAGCCGGGGCTGGATATAATATAAATGTACCCTGGGAGAATGGGAGATGTGGTGATGCTGATTACTTTGCAGTGTGGGACCACATTTTGCTCCCGGTTGCCAAAGAATTTAATCCAGACATAATTATTGTCTCTGCTGGATTTGATGCAGCTGTTGGTGACCCTCTGGGAGGATGTCTAATCACACCATTTGGTTATTCTATTCTGTTGGAAAAGTTGATGAATTTCGCTGAAGGTAGGATTGCACTGGTTTTAGAAGGAGGATATAATCTGGACTCCATTGCAAACTCAATGCATGCTTGTGTTGAAGTTTTGCTTGACGGCAAACCCGTTACCGAATCTTCAAAGGCTTACCCATTTGAGTCCACATGGCGTGTGATTAAAGCGGTTCGTCAGGAGTTAAGTCCCTTTTGGCCTTGTCTTGCTAGTGAATTACCAAAAGATTTAATTTGTCTAGTTGCACCACCTCCGCATACTCTTATTTCAAGCTCCGACTCTGAGGCAGAGGATGACATGGATCCCCTCAATTCTGATAACCTTGGAGAACTTCTTCAGGATCTCATAATACCGCTATCTAACCTGAAAGTTGATACAGATCAAGTGATTGGTACTTCTAATACTTGGCGATCAGAACTGTCAAATACTTATGTATGGTATGCCTCTTATGGATCAAATATGTGGAAATCAAGATTCTTGTGTTATGTAGCAGGTGGACAGGTGGAAGGTATGCAAAAGCACTCTTCTGGTTCAGTGGACAAAGCTCCACCAAAGGAAATCCTTTGGAAGACTTTCCCTTGCCGTATATTTTTTGGTCGCAATTCTTCCAAGTCATGGGGTCCTGGAGGGGTCACATTTCTTAATCCTGAGAGAACTTTTCAGCACAATACCTACCTATGCCTGTACAAAATTTCGCTAGAGCAGTTCAATGATGTTTTACTTCAGGAAAACGGTTTAAGCCTTAATGTGGGTTCTCCTTTATTTGATATAACTGCCCTTAATGCTATCTCTGAGAAGGAGTTCAATTCTTCAGAGGCTGTCAAGGGTTCTTGGTATGGTGATGTTGTCTACTTAGGAAAGGAGCAGAATATCCCAATTCTTACCATGACGTGTTCATTTCTCGATATTGAACGCTTTAAAGCGGGGGAGCTGCCATTAAATGCTCCTAATAAAGCATATGCCAACACCTTAATTAAAGGGTTGGTAGAGGGAGAACAACTTTCAGAGGTGGAAGCCATTGCTTACATAGAAGAAGCTGCTGCTAAACCCTTGTAA 1971 0.413 MASVVTNNGNEVNGQRRVGLIYNDRMCDHFSLQDHHHPEAPDRIRVIWNKLNKTGICDRCVILDAKEAEDKYIQLVHSKSHVNQIKHISTKQYDSRRHKIALKLNSIYFNEGSSKAAYLAAGSAVEVVEQVASRQLHSAVAIVRPPGHHAEHNEAMGFCLFNNVAISASYLLDERPELGIKKILIVDWDVHHGNGTQKTFWNDSRVLFFSVHRHEFGTFYPCGDDGFYTMVGEGAGAGYNINVPWENGRCGDADYFAVWDHILLPVAKEFNPDIIIVSAGFDAAVGDPLGGCLITPFGYSILLEKLMNFAEGRIALVLEGGYNLDSIANSMHACVEVLLDGKPVTESSKAYPFESTWRVIKAVRQELSPFWPCLASELPKDLICLVAPPPHTLISSSDSEAEDDMDPLNSDNLGELLQDLIIPLSNLKVDTDQVIGTSNTWRSELSNTYVWYASYGSNMWKSRFLCYVAGGQVEGMQKHSSGSVDKAPPKEILWKTFPCRIFFGRNSSKSWGPGGVTFLNPERTFQHNTYLCLYKISLEQFNDVLLQENGLSLNVGSPLFDITALNAISEKEFNSSEAVKGSWYGDVVYLGKEQNIPILTMTCSFLDIERFKAGELPLNAPNKAYANTLIKGLVEGEQLSEVEAIAYIEEAAAKPL* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1059 656 SUPERFAMILY Arginase/deacetylase 16 374 IPR023696 -
Lan1g1059 656 Pfam Histone deacetylase domain 37 337 IPR023801 -
Lan1g1059 656 PRINTS Histone deacetylase superfamily signature 145 168 IPR000286 -
Lan1g1059 656 PRINTS Histone deacetylase superfamily signature 272 282 IPR000286 -
Lan1g1059 656 PANTHER HISTONE DEACETYLASE 11 615 - -
Lan1g1059 656 PANTHER BNAA09G05590D PROTEIN 11 615 - -
Lan1g1059 656 Gene3D - 438 654 - -
Lan1g1059 656 Gene3D Histone deacetylase domain 11 384 IPR037138 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1059 Lan-Chr1 20787440 20795524 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1059 K11406 - gmx:100788831 1064.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1059 1 20787440 20795524 Lan1g1059 1 20787440 20795524 ECH
Lan1g1059 1 20787440 20795524 Lan15g0428 15 9597641 9600810 PCT
Lan1g1059 1 20787440 20795524 Lan3g0671 3 11024360 11027382 PCT