Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1038 ATGAACTCCATCGCCCTCAAATCCTTCATCGGACTCCGCCATTCCTCGACGGAGCCCCGCCACTTCTCCGCTCAACCCAAACCCCTCACTCTCAACCGCAAACTCAAGGTCGTCGCCGGAAAGTACAGCCCCAAGGTCCAAGGTCGCAACCTCCGTGTCGCCATCGTCGGTGGCGGCCCAGCTGGAGGCGCTGCCGCAGAAACATTAGCAAAGGGTGGTGTAGAAACATTCATAATCGAACGAAAACTCGATAACTGCAAGCCATGCGGTGGAGCTATTCCACTTTGCATGGTGGGAGAGTTCGACCTTCCATTAGATATCATCGACCGCCGTGTCACAAGGATGAAGATGATATCTCCGTCGAACGTGGCGGTGGACATTGGAAGAACACTGAAGCCGCATGAATATATAGGAATGGTTCGGCGTGAGGTGTTGGATAATTATTTGAGAGAACGAGCAAAGGAAAATGGAGCGAATATCATAAATGGGTTGTTCTTGAAAATGGATATACCAAAGGATAAGGAATCACCGTATGTGTTGCATTACTCTGGCTATGATGGTAAAACTGGTGGAGTTGGTGAGAAGCTTACGTTGGAAGTTGATGCTGTGATTGGTGCTGATGGAGCTAATTCAAGAGTTGCTAAGGCTATTGATGCTGGTGACTATGAATATGCCATTGCATTTCAGGAGAGGATAAAAATACCAGATGATAAGATGGTGTATTATGAGAATCTTGCAGAGATGTACGTAGGTGATGACGTTTCACCGGATTTCTATGGGTGGGTGTTTCCAAAATGTGACCATGTAGCTGTTGGAACCGGTACAGTGACACACAAGGGAGACATCAAGAAGTTCCAACAAGCAACAAGGAAAAGAGCCGAGGATAAGATTTTGGGAGGCAAAATCATCCGAGTGGAGGCACACCCTATCCCAGAGCATCCGCGGCCGCGAAGAGTGAAAGGCAGAGTGGCACTTGTTGGCGATGCTGCTGGCTATGTCACCAAATGCTCCGGAGAAGGGATCTATTTTGCGGCCAAGAGCGGAAGGATGTGTGCAGAGGCAATAGTTGCAGGCTCGGAGAATGGGAAGAGGTTGGTGGATGAAGGGGACTTCAGGAAGTACTTGGAGAAGTGGGATAAGACTTATTGGCCAACTTACAAGGTCTTGGATATTCTACAAAAGGTGTTTTATAGGTCCAATCCTTCTAGAGAAGCATTTGTGGAGTTGTGTGCTGATGAGTATGTGCAGAAGATGACCTTTGATAGCTATTTGTACAAGACGGTCGCGCCGAGCAATCCATTGGAGGATCTCAAGCTGGCTATTAACACCATTGGGAGCTTGGTTAGGGCCAATGCTCTTAGAGGGGAGATGAACAAACTTAATGTATGA 1389 0.4795 MNSIALKSFIGLRHSSTEPRHFSAQPKPLTLNRKLKVVAGKYSPKVQGRNLRVAIVGGGPAGGAAAETLAKGGVETFIIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTRMKMISPSNVAVDIGRTLKPHEYIGMVRREVLDNYLRERAKENGANIINGLFLKMDIPKDKESPYVLHYSGYDGKTGGVGEKLTLEVDAVIGADGANSRVAKAIDAGDYEYAIAFQERIKIPDDKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQQATRKRAEDKILGGKIIRVEAHPIPEHPRPRRVKGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVAGSENGKRLVDEGDFRKYLEKWDKTYWPTYKVLDILQKVFYRSNPSREAFVELCADEYVQKMTFDSYLYKTVAPSNPLEDLKLAINTIGSLVRANALRGEMNKLNV* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1038 462 Pfam Pyridine nucleotide-disulphide oxidoreductase 52 221 IPR023753 GO:0016491
Lan1g1038 462 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 52 74 - -
Lan1g1038 462 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 199 214 - -
Lan1g1038 462 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 320 335 - -
Lan1g1038 462 SUPERFAMILY FAD/NAD(P)-binding domain 51 428 IPR036188 -
Lan1g1038 462 Gene3D - 50 461 IPR036188 -
Lan1g1038 462 TIGRFAM BchP-ChlP: geranylgeranyl reductase 52 449 IPR010253 GO:0015979|GO:0015995|GO:0045550
Lan1g1038 462 PANTHER GERANYLGERANYL DIPHOSPHATE REDUCTASE 36 461 - -
Lan1g1038 462 TIGRFAM GG-red-SF: geranylgeranyl reductase family 53 355 IPR011777 GO:0016628
Lan1g1038 462 PANTHER OS01G0265000 PROTEIN 36 461 - -
Lan1g1038 462 TIGRFAM ChlP: geranylgeranyl reductase 51 449 IPR011774 GO:0045550
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1038 Lan-Chr1 20663078 20665285 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1038 K10960 - gmx:100779933 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1038 1 20663078 20665285 Lan1g1038 1 20663078 20665285 ECH
Lan12g1246 12 18421178 18450454 Lan1g1038 1 20663078 20665285 LSH
Lan1g1038 1 20663078 20665285 Lan1g0094 1 719999 722331 LSH