Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0941 ATGGCTTCTACGGCTGTTGCCACCACCACCGCCACCGCCACCGCCACTGGCATCATTGAACCACCGCACCAGCAGACGCTGGATCCTCCTTCTTCCTCGAGACCTTCATCCGCCTCTGCCGAAGACGCCGTTGATCGCTATGATTCTTGCAATTCCTCGCCGAATCTTTTGCGAGAGTCTGAAATTCAGTTACAGTCTATGGACGTATTGAAGAGTGAAGAGTATCGGCAGTTGTTTCATCTTCCACTAGAGGAAGTTCTTATTGAAGATTTTAATTGTGCCCTTCAGGAAAACATACTTATTCAGGGTCATATGTACCTCTTTGTCAACTTCATTTGTTTCTACTCAAACATATTTGGGTTTGAGACAAAGAGAATAATCCCATTACCTGAAGTCACAGGCGTGCGGAGGGCAAAAACAGCTGGACTCTTTCCCAATGCCATTGAGATTATTGCTGGAAGCAGAAAGCATTTCTTTGCATCCTTCCTTTCCCGTGACGATGCTTTCAAGATCATTAATGATGGATGGTTGCGACGGTGTAATGGTTCCACAATAATTACTGAACAGCAGGAATCAATATCCGAGTTAAGCAGCCAAGAGAATGGATTTATAGCTATTGAAAATGTCAAAAGTGCCGAAATACTAGACAAAGAATCACTTTTTTCCGAACTGAGCAAAGATACTTCTATATGCAAAGATGTGGGGCTTCCATCCCATGTTGGAGATGACCCTGAATTGATGACTGCTCCAGAGAAGCAATCAAGTATGATACAGGTTGCTAAACCTGTACTGAATAATGATGCCCCAAGTGTGAGTTGGAACTGGAAGGAGGACGATATTGATGCCCCAACAATTCCAGAAGGTTATACATGTGTTGCAGAATCAGTGTTTCCGATAATGGTTGAAGACTTCTTTAGGTTCTTTTTTTCAGATGATGGTGTAAAGTTTCTCGAGTCATTTCATAAAAGATGTGGTGATAAAGACTTTGTGTGTTCTTCGTGGCATCCTCAAGAGAAGTTTGGGTATGCTCGTGAAGTGTCATTTCAACACCCAATCAAACTTTATCTTGGAGCAAAATTCGGTGGCTGCCATGTCGTCCAGAAATATCGAGTTTATAGGACCAGTCATTTGGTTATTGAGACCGTGCAAGATGTCACTGATGTACTTTACTCAGATTATTTTCGCGTTGAGGGGCTGTGGGATATAGAAAGAGACAAGGATGAATCAAAAGAATGCTGCATTTTGCGGGTATATGTGAATGTGGCATTTTTAAAGAAAACTATTTGGAAAGGCAAAATAGTACAGGGTACAATTGATGAATGTCGAGAAGCTTATGCCACATGGATGAACATGGCACATGAGTTGCTAAAGCAGAAAAACCTTGAAGAACAAGAAAGCAGTGCTATTGCTGTTGTAACTCAAAATGACAACATAAATTTTCATAGAGAGGGGAAGACTGAAGAATCTTCAGAAGCGTCAATTGAGCAGATTAACCCTACAACAATACAAACTACGTCCAACGTATCTGATGCTACCCACAATGTCAACAGTAGTTTGCAAGGGAATTTCATTGACACGACATCTATTCCATCTTTGTTCAAAGAGTTTATGACAAAGTTCAGGTTGTCTTTGAAAAATCAAAGCAATCTTTCAATGCTCCTTGTTACCATTTTCACCCTGATTTTCTTCATGCAGTTTAGCATACTTATGCTGTTGGCCAGACCTCAACAGATACATGTGAGTACTGGTGCAGATTATATGAATAAGATGGGAAGTGGAATGACCAGAAATCCTTCAGACATAGCTTGGATGGAGAAAAGAATTCATCACCTTAAAGATGAGATGTACATGGTAGAGACTAGGCTTGAGAGGATGCGGTATGAGCATGCACTCTTAAAAAACCAACTAAAGGATCTAGACCTTAAATAA 1929 0.4106 MASTAVATTTATATATGIIEPPHQQTLDPPSSSRPSSASAEDAVDRYDSCNSSPNLLRESEIQLQSMDVLKSEEYRQLFHLPLEEVLIEDFNCALQENILIQGHMYLFVNFICFYSNIFGFETKRIIPLPEVTGVRRAKTAGLFPNAIEIIAGSRKHFFASFLSRDDAFKIINDGWLRRCNGSTIITEQQESISELSSQENGFIAIENVKSAEILDKESLFSELSKDTSICKDVGLPSHVGDDPELMTAPEKQSSMIQVAKPVLNNDAPSVSWNWKEDDIDAPTIPEGYTCVAESVFPIMVEDFFRFFFSDDGVKFLESFHKRCGDKDFVCSSWHPQEKFGYAREVSFQHPIKLYLGAKFGGCHVVQKYRVYRTSHLVIETVQDVTDVLYSDYFRVEGLWDIERDKDESKECCILRVYVNVAFLKKTIWKGKIVQGTIDECREAYATWMNMAHELLKQKNLEEQESSAIAVVTQNDNINFHREGKTEESSEASIEQINPTTIQTTSNVSDATHNVNSSLQGNFIDTTSIPSLFKEFMTKFRLSLKNQSNLSMLLVTIFTLIFFMQFSILMLLARPQQIHVSTGADYMNKMGSGMTRNPSDIAWMEKRIHHLKDEMYMVETRLERMRYEHALLKNQLKDLDLK* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0941 642 Coils Coil 622 642 - -
Lan1g0941 642 PANTHER PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTIC 28 639 - -
Lan1g0941 642 Gene3D - 71 178 IPR011993 -
Lan1g0941 642 MobiDBLite consensus disorder prediction 1 47 - -
Lan1g0941 642 CDD PH-GRAM_GRAMDC 84 176 - -
Lan1g0941 642 Pfam VAD1 Analog of StAR-related lipid transfer domain 292 440 IPR031968 -
Lan1g0941 642 Pfam GRAM domain 76 176 IPR004182 -
Lan1g0941 642 ProSiteProfiles VASt domain profile. 288 460 IPR031968 -
Lan1g0941 642 MobiDBLite consensus disorder prediction 1 39 - -
Lan1g0941 642 SMART gram2001c 73 139 IPR004182 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0941 Lan-Chr1 20075151 20086696 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0941 - - gmx:100805910 846.269