Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0916 ATGGGAACTGTTGTTGAGGCTGCAAACAAGGGTGTAAATGGAAGCATCACAGAGAAAAATCCTACTGTCGTTTTTGTGTTAGGTGGCCCAGGCAGCGGAAAGGGTACCCAATGTGCAAACATTGTGGAACATTTTGGGTACACTCACCTCAGCGCTGGTGATCTTCTGCGAGCAGAAATCAAATCTGGTTCTGAAAATGGAACAATGATTCAGAATATGATTAAAGAAGGAAAAATTGTTCCCTCAGAGGTAACAATCAAGCTTCTGCAGCGAGCAATGCAGGAAAGTGGCAATGACAAATTTCTTATTGATGGTTTTCCCCGCAACGAGGAAAACCGTGCAGCATTTGAGAATGTGACAGGAATAGAGCCAGCATTTGTCCTCTTTTTTGATTGCCCTGAGGAAGAGATGGAGAGGCGACTTCTTAGTAGGAACCAGGGCAGAGAAGATGACAATATTGAAACAATAAGGAAGCGGTTTAACGTCTTCTTGGAGTCTAGTCTCCCAGTTATTAATTATTATGATGGAAAGGCAAAAGTTCGCAAGATTGATGCTGCAAGGCCTGTTCAAGACATATTTGAGACAGTCAAAGCAATTTTTGCTCCAAAAAATGAAAAGGCTGATTGA 627 0.4226 MGTVVEAANKGVNGSITEKNPTVVFVLGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQRAMQESGNDKFLIDGFPRNEENRAAFENVTGIEPAFVLFFDCPEEEMERRLLSRNQGREDDNIETIRKRFNVFLESSLPVINYYDGKAKVRKIDAARPVQDIFETVKAIFAPKNEKAD* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0916 208 Hamap UMP-CMP kinase [CMPK1]. 21 203 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Lan1g0916 208 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 200 IPR027417 -
Lan1g0916 208 TIGRFAM UMP_CMP_kin_fam: UMP-CMP kinase family 23 200 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Lan1g0916 208 Gene3D - 9 201 IPR027417 -
Lan1g0916 208 ProSitePatterns Adenylate kinase signature. 101 112 IPR033690 -
Lan1g0916 208 PRINTS Adenylate kinase signature 25 38 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lan1g0916 208 PRINTS Adenylate kinase signature 53 67 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lan1g0916 208 PRINTS Adenylate kinase signature 101 117 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lan1g0916 208 PRINTS Adenylate kinase signature 148 163 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lan1g0916 208 PRINTS Adenylate kinase signature 165 179 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lan1g0916 208 PANTHER UMP-CMP KINASE 1 205 - -
Lan1g0916 208 Pfam Adenylate kinase 26 177 - -
Lan1g0916 208 PANTHER NUCLEOTIDE KINASE 1 205 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lan1g0916 208 Hamap Adenylate kinase [adk]. 22 201 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lan1g0916 208 CDD ADK 23 192 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0916 Lan-Chr1 19904376 19908346 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0916 K13800 - gmx:100500111 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g0916 1 19904376 19908346 Lan1g2057 1 35746752 35753217 LSH