Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0908 ATGGGACAAGTCTTAGATAAGTTACATGGTAAGGAGTGGAGGCAAAAGCAAATAAGGAAGATAACGAACCGAGTTTACGAATATGTAAAGATTCAACCAGGAACAGCTAATCTCACTTTTGAAGATCTCTATATTGCTGTTTTGCTTGTGTACAATGATATCAATAAGCTTTTGCCTGGTCCACATTTTGATCCTCCATCAAAAGACAAAGTTAGAGAAATCATTAAGAACTGCGATATCAACCTCGATGGGGAGATCGACCGCGAAGAATTTTTTAGTTTCATCCAGCAGATGACAGCTGATACATTCACTTATGTTAGTCAGAAACTTATTGTGACTATGGTTGTAGCGCCAACAATTGCTGTGGCAACAAAGAGAGCCACCGAAGGTGTCCCAGGTGTTGGTCGGGTGGTGCAAAGGTTACCCAATTCGGTCTACGCGACCCTTGTGACAGTTGCAGCTATGTGGTTCCAAAACATGGGACAAGATTCTTAA 495 0.4162 MGQVLDKLHGKEWRQKQIRKITNRVYEYVKIQPGTANLTFEDLYIAVLLVYNDINKLLPGPHFDPPSKDKVREIIKNCDINLDGEIDREEFFSFIQQMTADTFTYVSQKLIVTMVVAPTIAVATKRATEGVPGVGRVVQRLPNSVYATLVTVAAMWFQNMGQDS* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0908 164 PANTHER S100 CALCIUM-BINDING PROTEIN 4 163 - -
Lan1g0908 164 SUPERFAMILY EF-hand 20 95 IPR011992 -
Lan1g0908 164 Gene3D - 16 117 - -
Lan1g0908 164 PANTHER CALCIUM-BINDING EF HAND PROTEIN 4 163 - -
Lan1g0908 164 SMART efh_1 70 98 IPR002048 GO:0005509
Lan1g0908 164 ProSiteProfiles EF-hand calcium-binding domain profile. 66 101 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0908 Lan-Chr1 19851857 19854653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0908 1 156 EF-hand Containing Proteins AT1G64850 69.872 4.11e-84 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0908 - - gmx:100526914 260.766