Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0901 ATGAAGAGTGTCGCGATAAAGAATACAACCTCGGAAGAATCGAACCTTGTTTCTGCTCCTGTTGCTGTTGCTGGTGCTGACGTGGCAGCGGATGCTGAATTTGTCGAAGGTGGTGTTGCTGACGTGGCAGTGGATGGTGAATTTGTCGAAGGTGGTGTTGCTGACGTGGCAGCGGGTGGTGAATTTGTTGGTGGTGGTGACGTGGCAGCGGGTGGTGAATTTGTCAAAGCTGGTGGTGCTGACGTGGCAGCGGGTGGTGGTGCTGACGTGGCAGCGGGTGGTGGTGGTGACGTGGCAGTGGGTGGTGAATGTGGTGGTGGTGGTGGTGACGTGGCGGTGGGTGGTGAAGAAGAGAAAGAAGGGAGAGAGGATTATGAAGAAGAAGAAGAGGAGGAAGAGGAATATGAAAATCAACTTCCTCCTCTTTCTGCTGATTCTGAGCTCTATCTAGTTCAAGCTATTCGTCGGAAGAGGGTTATAAAGGGTCAGGTCCAGTATCTGGTAAAATGGCTTGGGTGGCCCGAGTCGGCCAACACTTGGGAGCCTCCGGAACATCTAACATCTGTTCGTGACCTCATTGAAGCTTTTGAGGAGAGCTCGGCATCAGTAAAACAGCGTAAACGCAGAAGCTCTAGTGTGTCTAATCCCTCTCAACTTAAGAAGAGGCAGGAGCGTTCTAATACTCCTTACAGCCTTAGACGTATTCGCGATGCTAATGCTGAGAATCATACACAGTCTGCTCCTCCGAATGATGCTAATATTCCTGATCCTTGTGCTTTTCCTCAAGCTGTGCTTTTTGCTGATGAATTAGAAAACAATGGCGAGCCCAGCAGTCTTGGAAAAGCCAAAGTTTCTGATGGCAGTGGGTCTACAAATCCTCCAGAACTTTCTAAAAGCAATGAGGAAAATGAGTATGATCCCAAGCTTTGTGAGCTAAAAGCAGCCTCAACCAGTGGACATGGTGCAGCAGACAGGCCTCCGACACAGGTTCAAGAAGGTAATGTTGCAACCGACAATGGTCAGGTGGATGGTCGGTTGAAGGGTGTTCATGTGGAACAAGAAAGTGACAGCTCAATAGGAGCTAAAAAGAAGAAATCGACAGAGGACTCACATGCTGGTGAGCCTGTTACTGCAGAAAAACCAATTGGCACACCCGCTAGCACATTTGTACCAGTACGAGCAGAGATGCCCGATTTTGTGTGGCATAAGAGTCAAAAGAAGAAGAAGAAGGTTCTTGCTACACCTGTCTACGATATTACCAAGATTATAAAGCCATTAGGCTGTTCACCTACACTATCTGGCGAACTGTGTGTGACCTTTATTGCCTCGAGGTGGGACGGAACCGAAGTGATGGTTGACAACGGATATCTCAAGTTACACCATCCGGAACTGCTGATCGAGTTCTACGAGCGGCGTATCAACTACAACACTCTCTGA 1437 0.4871 MKSVAIKNTTSEESNLVSAPVAVAGADVAADAEFVEGGVADVAVDGEFVEGGVADVAAGGEFVGGGDVAAGGEFVKAGGADVAAGGGADVAAGGGGDVAVGGECGGGGGDVAVGGEEEKEGREDYEEEEEEEEEYENQLPPLSADSELYLVQAIRRKRVIKGQVQYLVKWLGWPESANTWEPPEHLTSVRDLIEAFEESSASVKQRKRRSSSVSNPSQLKKRQERSNTPYSLRRIRDANAENHTQSAPPNDANIPDPCAFPQAVLFADELENNGEPSSLGKAKVSDGSGSTNPPELSKSNEENEYDPKLCELKAASTSGHGAADRPPTQVQEGNVATDNGQVDGRLKGVHVEQESDSSIGAKKKKSTEDSHAGEPVTAEKPIGTPASTFVPVRAEMPDFVWHKSQKKKKKVLATPVYDITKIIKPLGCSPTLSGELCVTFIASRWDGTEVMVDNGYLKLHHPELLIEFYERRINYNTL* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0901 478 PANTHER CHROMO DOMAIN-CONTAINING PROTEIN LHP1 116 477 IPR044251 GO:0006325|GO:0031507
Lan1g0901 478 MobiDBLite consensus disorder prediction 283 298 - -
Lan1g0901 478 MobiDBLite consensus disorder prediction 206 225 - -
Lan1g0901 478 Coils Coil 118 138 - -
Lan1g0901 478 MobiDBLite consensus disorder prediction 272 304 - -
Lan1g0901 478 CDD CD_CSD 149 198 - -
Lan1g0901 478 MobiDBLite consensus disorder prediction 345 375 - -
Lan1g0901 478 Pfam Chromo (CHRromatin Organisation MOdifier) domain 150 198 IPR023780 -
Lan1g0901 478 MobiDBLite consensus disorder prediction 107 138 - -
Lan1g0901 478 ProSiteProfiles Chromo and chromo shadow domain profile. 149 208 IPR000953 -
Lan1g0901 478 SUPERFAMILY Chromo domain-like 135 207 IPR016197 -
Lan1g0901 478 MobiDBLite consensus disorder prediction 316 384 - -
Lan1g0901 478 MobiDBLite consensus disorder prediction 199 232 - -
Lan1g0901 478 ProSitePatterns Chromo domain signature. 166 186 IPR023779 -
Lan1g0901 478 SMART chromo_7 148 201 IPR000953 -
Lan1g0901 478 Gene3D - 143 214 - -
Lan1g0901 478 MobiDBLite consensus disorder prediction 120 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0901 Lan-Chr1 19781512 19784916 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0901 - - lang:109359412 712.99