Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0900 ATGGCTTTCCCTATCAAACTCGATCAGATTCTGGTGGAACAAAAGTTATCTGCTAGAATTGTGATACTTAACAGGCTCAAGCAATTGAATGCTTTATCTTTTTATATGGTATCTCGGCTACTGGAAATTTTTCAAGAAGATGAAGCAAATCCTAATGTTAAATTGGTTGTTGTGAAGGGAAATGGAAGGTCATTTTGTGCCGGTGGTGATGTTGCAGCCGTTGTTCGTGATGTGAAAGGAGGTGACTGGTGGTTAGGTGCAAAGTTTTTTGAGACTGAATATAAACTAAATTACTTGATGGCAACATATAGTAAGCCCCAGGTTTCAATTCTTAACGGAATCGTCATGGGAGGTGGTGCTGGTGCTTCTGTTCATGGTCGATTTCGTGTTGCTACAGAGAATTCAGTCTTTGCAATGCCAGAAACAGCTTTGGGTCTATTTCCTGATGTAGGTGCCTCATATTTCTTGTCCAGGCTACCTGGATTTTTTGGAGAATATGTTGGTCTTACAGGTGCTAGGTTGGATGGTGCAGAAATGCTTGCTTGTGGTCTTGCAACACATTTTGTCCCTTCATCAGAATTGTCTTTATTGGAAGAATCATTATGCAAGGTGGAAAGTGTTGATCCAATTGCAGTATCTGCAAGTATCGATAAGTTCTCGCAGCAACCTGTCCTAAAAGAGAATAGTGTTTATCACAGGATGGATGTCATCAACAAGTGTTTCTCTAGAAAATCGGTCGAGGAAATTATATCATCTCTTGAGCTGGAAGCTCAGAGTAAGGCTGATAATTGGATTTCTGCAACTATCCAAACCTTAAAGAAAGCATCTCCAACAAGCCTTAAAGTCTTCCTTAGATTGATTAGAGAAGGGAGGCTCCTAGGTGTTGGTCAATGCCTTGTTTTGGAGTATAGAGTTGTTTGTCATATTTTACAAGGACATCACAGCAAGGATTTCTTTGAGGGTTGTAGAGCTATACTGATAGATAAAGACAAGAACCCAAAGTGGGAGCCTTGTAAATTGGAGCTTGTAAGTGATACCGATGTCTACCGGTACTTCTCTAAGCTTGATGATGAAGGATGGAATGATTTGGAGCTTCCCAAAAGGAACAACAATTTACCTAAATATGCCATTGCCAAGCTTTAA 1143 0.4016 MAFPIKLDQILVEQKLSARIVILNRLKQLNALSFYMVSRLLEIFQEDEANPNVKLVVVKGNGRSFCAGGDVAAVVRDVKGGDWWLGAKFFETEYKLNYLMATYSKPQVSILNGIVMGGGAGASVHGRFRVATENSVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATHFVPSSELSLLEESLCKVESVDPIAVSASIDKFSQQPVLKENSVYHRMDVINKCFSRKSVEEIISSLELEAQSKADNWISATIQTLKKASPTSLKVFLRLIREGRLLGVGQCLVLEYRVVCHILQGHHSKDFFEGCRAILIDKDKNPKWEPCKLELVSDTDVYRYFSKLDDEGWNDLELPKRNNNLPKYAIAKL* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0900 380 SUPERFAMILY ClpP/crotonase 8 337 IPR029045 -
Lan1g0900 380 CDD crotonase-like 10 190 - -
Lan1g0900 380 Gene3D - 6 368 - -
Lan1g0900 380 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE 1 8 380 - -
Lan1g0900 380 Pfam Enoyl-CoA hydratase/isomerase 19 352 IPR045004 -
Lan1g0900 380 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 8 380 IPR032259 GO:0003860
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0900 Lan-Chr1 19772065 19779671 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0900 9 380 Miscellaneous Gene Families AT5G65940 69.892 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0900 K05605 - gmx:100170729 597.816