Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0895 ATGGAACAGCCAGAAAGACAATCTAGTTTCAGAAAATGTTCATCTGCTATCAAAACCAAAGTTGTCAATAACTTAAATCCGGTATGTCATTCCGGCCTAGAATTAACACTCAAGGGGAAGTTCTTGGTAGCACATAATCACGGGAAATCGATACCTGGAAAATTAGTTTCTGTTCAGATTTATAGTGGAACAGAAGTTGATCCTAATACAGGGAAAGGAAAGTTGAGCGAAAAAGCGTATTTCAAGCATGGAGGAAGCAATAAAAATCAGCATGATGCACAAACCATGACATATACAACTAGAGTACATGTTGACTCACATTTCGGCATTCCAAGAGCTTTTCTGATTCAAAACAATTATCAGAAATTCTTCCTTCTCTCTGCATCTATTGAGACTTCTAACAATCAGATAATTTACTATGATTGCAATTCTTGGATATATCCATTCAAGAAGACCAAATCTGATAGACTCTTCTTCTCAAATAGATGCTATCTTCCAATTCAAACACCAAGAGCACTAGTGGAACTAAGAAAAGAAGAGCTTGATAGATTGAGGGGTAATGGGACCGGAGAAAGAAACGAATGGGATCGAATCTACGACTATGACTGCTACAATGACCTTAGTGATCCTGATAAAGGTCCAGATCATCTTAGACCTATCCTAGGCGGGTCTAAGTTATATCCCTATCCTCGCAGAGGAAGAACAGGTCGTAAACCGAGTCTAGCAGGTCCTTCAACTGAAAGCCGGCCACAAGCACTTAATTTTGACATATATGTTCCATCAGATGAGAGATTTGGCCCCAATAAATTGAAGGAGCTCAAATCAAATTGTATCCATGCTATGATACACTTTTTACCACCTAAGGCAGAATCATTACTTCAGAAAAATTCTAGAAGCTTTGATTCATTTGAAGAGATACTTGACATGTTCTCTAGCAATCGAAACCGAAAAGTCGAGGGATGGATCAGAGACAACTTAAAGAAAATGATACCAGTTGAGCACTTAAAGGAAATAACTCGCACAATGAAGAAAAACCCTCCGAAATTTCCTATCCCTCAAATCATATCAGAAAATGAATGGACTTGGAAAGATGATATAGAGTTTGGACGACAAATGCTTGCAGGAACTCACCCTGTCAAAATCCAATGCTTGAAGAACTTCCCACCTAAAAGCAAATTCGGAGTAGAGAGTTCAATAAATCCATTAATCATAGAACCGAAGCTTGAAGGATGGACACTTCCTCAGGCATTGGAACAGGGAAGAATATTCATGCTGGACCACCATGACTATATCATTCCATTTTTGAACAGAATGAACAAAAATGGGATCTGTGCCTATGCATCCAGGACAATACTATTCTTAAGGAGTGATGGTATGCTCAAGCCGATGGCGATAGAACTTAGCTTGCCAGGCTCATCTCTAGGATATGAAGTCCCGAAAGTTTTTGTTCCAGCCAAACAAGGGACGGAAGCAGCGCTTTGGCAGCTCGCTAAAGCTCACGTCTTAGCTAATGATGCTGTTTATCATCAACTAATGAGCCATTGGTTGCACACCCATGCAGTTGTTGAACCATTTATCATAGCCACTAAAAGACGGTTGAGTGTTATGCATCCGATCCATCGGATCTTGAATCCACATTTCAAAGACACCATGCACGTAAATGCCTTAGCACGACTTATCCTTATAAACTCGGGAGGAATTCTGGAGAGAACATTATTCCCTGGTGAGTTCTCTATGCAAATTTCTTCTGAGCTCTATAAAGAGTGGAGATTTGATGAACAAGGTCTTCCTGCTGATCTACTCAAAAGGGGCATTGCTATAGAAGACTCAGATGTAAACAACCCTACTGGGATTAAGCTCATCTTGCAGGACTATCCCTATGCCATTGATGGACTAGAAATATGGGTTGCCATCAAAAAATGGGTCAATAGCTTCTGCTCATTCTTCTACAACAACAATGATGCCGCCATCAAGGCTGATGTTGAACTCCAAGGTTGGTGGTCCGAAATTCGAACTCATGGTCATAGTGACAAACAAAGTGAGACATGGTGGTATGAAATGACTACACTAACAAATCTTGTAGAAGCATTAACAACTCTCATATGGACTGCTTCTGCTCAGCATGCATCTCTAAACTATGGCCAATATGATTACAATGGTTACCCTCCGAACCGTCCCACGCTATGCCGGAAGTTTATTCCGAATGAAGGAACAACTGAGTTTGGTGAGTTCCTAAAGGATCCTGATAAGTTTTTACTCAATATGTTACCTGACAGGTTTGAGATGAGTCTTGCTGTGGCATTGGTAAATGTCCTCTCTCAGCACACCTGTGATGAAGTTTACTTGGGTTGCAAGTCATCACCGGGGTGGATAGATAATGAATTGATTCAGAATATATTTGCAGAGTTCAGAGAAGAATTGAAAGATATTCAAACAAGGATCTTAGAAAGAAACAGAGATCCCAAGCTTAAGAATCGACGAGGACCTGCAAATATTGAATACACTCTTTTGTATCCGAAGATGTCCTCTAGTTCTGGGTCAAAACATGAAACCATGGCAAGAGGAATACCAAATAGCATCTCAATATAA 2589 0.4017 MEQPERQSSFRKCSSAIKTKVVNNLNPVCHSGLELTLKGKFLVAHNHGKSIPGKLVSVQIYSGTEVDPNTGKGKLSEKAYFKHGGSNKNQHDAQTMTYTTRVHVDSHFGIPRAFLIQNNYQKFFLLSASIETSNNQIIYYDCNSWIYPFKKTKSDRLFFSNRCYLPIQTPRALVELRKEELDRLRGNGTGERNEWDRIYDYDCYNDLSDPDKGPDHLRPILGGSKLYPYPRRGRTGRKPSLAGPSTESRPQALNFDIYVPSDERFGPNKLKELKSNCIHAMIHFLPPKAESLLQKNSRSFDSFEEILDMFSSNRNRKVEGWIRDNLKKMIPVEHLKEITRTMKKNPPKFPIPQIISENEWTWKDDIEFGRQMLAGTHPVKIQCLKNFPPKSKFGVESSINPLIIEPKLEGWTLPQALEQGRIFMLDHHDYIIPFLNRMNKNGICAYASRTILFLRSDGMLKPMAIELSLPGSSLGYEVPKVFVPAKQGTEAALWQLAKAHVLANDAVYHQLMSHWLHTHAVVEPFIIATKRRLSVMHPIHRILNPHFKDTMHVNALARLILINSGGILERTLFPGEFSMQISSELYKEWRFDEQGLPADLLKRGIAIEDSDVNNPTGIKLILQDYPYAIDGLEIWVAIKKWVNSFCSFFYNNNDAAIKADVELQGWWSEIRTHGHSDKQSETWWYEMTTLTNLVEALTTLIWTASAQHASLNYGQYDYNGYPPNRPTLCRKFIPNEGTTEFGEFLKDPDKFLLNMLPDRFEMSLAVALVNVLSQHTCDEVYLGCKSSPGWIDNELIQNIFAEFREELKDIQTRILERNRDPKLKNRRGPANIEYTLLYPKMSSSSGSKHETMARGIPNSISI* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0895 862 ProSitePatterns Lipoxygenases iron-binding region signature 2. 536 546 IPR020834 GO:0016702|GO:0046872
Lan1g0895 862 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 163 862 IPR013819 GO:0016702|GO:0046872
Lan1g0895 862 PANTHER LIPOXYGENASE 90 860 - -
Lan1g0895 862 MobiDBLite consensus disorder prediction 228 248 - -
Lan1g0895 862 Gene3D - 165 267 - -
Lan1g0895 862 SUPERFAMILY Lipoxigenase 165 862 IPR036226 -
Lan1g0895 862 Gene3D - 269 359 IPR027433 -
Lan1g0895 862 PRINTS Plant lipoxygenase signature 130 148 IPR001246 GO:0016491
Lan1g0895 862 PRINTS Plant lipoxygenase signature 156 177 IPR001246 GO:0016491
Lan1g0895 862 PRINTS Plant lipoxygenase signature 195 211 IPR001246 GO:0016491
Lan1g0895 862 PRINTS Plant lipoxygenase signature 228 247 IPR001246 GO:0016491
Lan1g0895 862 PRINTS Plant lipoxygenase signature 297 318 IPR001246 GO:0016491
Lan1g0895 862 PRINTS Plant lipoxygenase signature 347 363 IPR001246 GO:0016491
Lan1g0895 862 PRINTS Plant lipoxygenase signature 446 470 IPR001246 GO:0016491
Lan1g0895 862 PRINTS Plant lipoxygenase signature 769 783 IPR001246 GO:0016491
Lan1g0895 862 Gene3D - 360 486 - -
Lan1g0895 862 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 49 164 IPR036392 GO:0005515
Lan1g0895 862 PRINTS Lipoxygenase signature 491 508 IPR013819 GO:0016702|GO:0046872
Lan1g0895 862 PRINTS Lipoxygenase signature 509 526 IPR013819 GO:0016702|GO:0046872
Lan1g0895 862 PRINTS Lipoxygenase signature 529 549 IPR013819 GO:0016702|GO:0046872
Lan1g0895 862 Gene3D - 487 861 - -
Lan1g0895 862 ProSitePatterns Lipoxygenases iron-binding region signature 1. 509 523 IPR020833 GO:0016702|GO:0046872
Lan1g0895 862 PANTHER LIPOXYGENASE 90 860 IPR000907 GO:0016702|GO:0046872
Lan1g0895 862 Pfam Lipoxygenase 173 839 IPR013819 GO:0016702|GO:0046872
Lan1g0895 862 Gene3D PLAT/LH2 domain 8 164 - -
Lan1g0895 862 SMART LH2_4 35 161 IPR001024 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0895 Lan-Chr1 19730572 19737687 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0895 53 862 Acyl Lipid Metabolism Gene Families AT3G22400 46.256 0.0 776
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0895 K00454 - gmx:100797946 1399.03