Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0882 ATGTATGCTGATAGAGTAGAGAGTGGAGCTAGAAGATCCGTGAAGGAACGCCTTCACGGCAATGGTAGCGATTCTACTCGCCAACAACGCCAAATCACTGGAAAGAGGCAGAGGCAAGATGACAAGTGGGAACATGATCTCTTTCATAATGATGAACCCCAGAACACTAATCGTAAAGTTACAGCTCAAGATCTTCGTCTTAAGCTTCAAAAGAAAGGTCTTCAATCCGCAGTTCAAAGTGGAAAGAGTTCTGCTCCCATCGTCCGTGATCTCCGTGAAAGGCTATCAGGGACAGTGACTCCACAACCTATAAACTCTGACCCACCAAAGACAAAAGTGGTTGTTAAACCAAGCAGTAGAAGTGTTGGTGTTGAAGCTCCTGCAGTACAAATCAAAATACCAAAACCAGCTCCTAAAAAGTTGTCACAGAAGGCTGATACTTCAGTGGATGAATTTTTGCAGTCCTTGGGTCTGGAAAAGTATCTCATAACTTTTCAGGCTGAAGAAGTTGATATGACAGCTCTCAATCATATGACTGATGAGGATCTCAAGGCTATGGGTATACCGATGGGGCCAAGAAAGAAGATACTTTTAGCATTGGAATCCAAAGTCTGA 615 0.4341 MYADRVESGARRSVKERLHGNGSDSTRQQRQITGKRQRQDDKWEHDLFHNDEPQNTNRKVTAQDLRLKLQKKGLQSAVQSGKSSAPIVRDLRERLSGTVTPQPINSDPPKTKVVVKPSSRSVGVEAPAVQIKIPKPAPKKLSQKADTSVDEFLQSLGLEKYLITFQAEEVDMTALNHMTDEDLKAMGIPMGPRKKILLALESKV* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0882 204 ProSiteProfiles SAM domain profile. 144 204 IPR001660 GO:0005515
Lan1g0882 204 SMART SAM_4 141 204 IPR001660 GO:0005515
Lan1g0882 204 Gene3D - 146 204 IPR013761 -
Lan1g0882 204 PANTHER OSJNBA0060P14.15 PROTEIN 1 108 - -
Lan1g0882 204 PANTHER OSJNBA0060P14.15 PROTEIN 135 191 - -
Lan1g0882 204 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 1 108 - -
Lan1g0882 204 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 135 191 - -
Lan1g0882 204 SUPERFAMILY SAM/Pointed domain 146 201 IPR013761 -
Lan1g0882 204 Pfam SAM domain (Sterile alpha motif) 143 201 IPR001660 GO:0005515
Lan1g0882 204 CDD SAM_superfamily 148 201 - -
Lan1g0882 204 MobiDBLite consensus disorder prediction 31 53 - -
Lan1g0882 204 MobiDBLite consensus disorder prediction 1 23 - -
Lan1g0882 204 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0882 Lan-Chr1 19623681 19630910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0882 37 203 Glycosyltransferase AT3G07170 61.905 1.82e-63 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0882 - - gmx:100784706 310.071