Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0847 ATGGATGCTCGTGTCGTTGAAGGAACCCTCAACACCGCTCAAACCACCGTCGTTGACGGAGCCTCCGCCAAATTTCTGCACCAGAATAATCATCAGTTAGGAACCGTTCATCAGCTTCTAGCTGGTGGCATCGCCGGTGCTTTTAGTAAAACTTGTACTGCACCGCTTGCGCGACTCACTATCCTTTTTCAGGTGCAAGGTATGCATTCAGATGTGTCAGCATTGAGCAAGCCTAGCATATTGCGCGAGGCTTCACGTATTGTGAACGAAGAAGGATTCAGAGCATTTTGGAAGGGCAATTTGGTGACCATTGTTCATCGTCTCCCATATTCTGCAGTCAGCTTCTATGCCTATGAACGTTACAAGAATCTATTATATTCTATGATGGGGGATAACTTTAGAGGAAATACAAGTGCTAACCTCTCTGTGCACTTTGTTGGTGGTGGTTTGGCAGGTATAACAGCTGCCTCTGCCACCTATCCGTTGGATCTTGTGAGGACACGCCTTGCAGCACAGAGAAGTACCATGTACTACAGGGGAATCTCACATGCTTTCAATACCATTTGTAGAGAAGAAGGTTTCTTCGGTTTGTATAAGGGGCTTGGAGCCACATTGCTGGGTGTTGGTCCTAGCATTGCTATAAGTTTTTCTGTGTATGAGGCATTACGTTCTTTTTGGCAGTCCCGGAGGCCAAATGAGTCAACTGTCATGGTCAGCCTTGTTTGTGGCAGTCTTTCAGGAATTGCTTCTTCAACAGCAACATTTCCTTTGGATCTTGTAAGGCGCAGGATGCAGTTAGAGGGTGCTGGTGGTCGAGCCCGTGTTTATAACACAGGCTTGTTTAAGACATTTGGGCACATTGTTCAGAATGAAGGGTTACGAGGATTATATAGAGGCATTTTGCCGGAGTACTACAAGGTTGTTCCTGGTGTGGGCATTGTCTTTATGACTTACGAGACATTGAAGATGCTTCTGTCAGGCACTCCAACTTCTTAG 996 0.4618 MDARVVEGTLNTAQTTVVDGASAKFLHQNNHQLGTVHQLLAGGIAGAFSKTCTAPLARLTILFQVQGMHSDVSALSKPSILREASRIVNEEGFRAFWKGNLVTIVHRLPYSAVSFYAYERYKNLLYSMMGDNFRGNTSANLSVHFVGGGLAGITAASATYPLDLVRTRLAAQRSTMYYRGISHAFNTICREEGFFGLYKGLGATLLGVGPSIAISFSVYEALRSFWQSRRPNESTVMVSLVCGSLSGIASSTATFPLDLVRRRMQLEGAGGRARVYNTGLFKTFGHIVQNEGLRGLYRGILPEYYKVVPGVGIVFMTYETLKMLLSGTPTS* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0847 331 SUPERFAMILY Mitochondrial carrier 32 321 IPR023395 -
Lan1g0847 331 PRINTS Mitochondrial carrier protein signature 38 51 IPR002067 GO:0055085
Lan1g0847 331 PRINTS Mitochondrial carrier protein signature 51 65 IPR002067 GO:0055085
Lan1g0847 331 PRINTS Mitochondrial carrier protein signature 99 119 IPR002067 GO:0055085
Lan1g0847 331 PRINTS Mitochondrial carrier protein signature 154 172 IPR002067 GO:0055085
Lan1g0847 331 PRINTS Mitochondrial carrier protein signature 198 216 IPR002067 GO:0055085
Lan1g0847 331 PRINTS Mitochondrial carrier protein signature 243 265 IPR002067 GO:0055085
Lan1g0847 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 33 124 IPR018108 -
Lan1g0847 331 PANTHER SOLUTE CARRIER FAMILY 25 22 330 - -
Lan1g0847 331 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 22 330 - -
Lan1g0847 331 Gene3D Mitochondrial carrier domain 28 327 IPR023395 -
Lan1g0847 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 139 225 IPR018108 -
Lan1g0847 331 Pfam Mitochondrial carrier protein 234 326 IPR018108 -
Lan1g0847 331 Pfam Mitochondrial carrier protein 141 227 IPR018108 -
Lan1g0847 331 Pfam Mitochondrial carrier protein 33 127 IPR018108 -
Lan1g0847 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 234 324 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0847 Lan-Chr1 19272916 19277841 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0847 1 329 Organic Solute Cotransporters AT2G37890 67.062 2.98e-162 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0847 - K14684 pvy:116126265 539.65