Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0751 ATGGCCCAGGTTACCAGAATCCACAATGGATTACAAATAACACAAAATTTTCATCAAATTCCCAATTCCCATAAACCCCATTTACCAAATTCAGTTTCATTGAAGTCACACCTTTGGGGTTCCTCAAAATCTTTGAGCTTGAAGCATAAAAATGGAGGCTTTATGGCAAATAAGGGAAATTCGTGTGTGGTTAGGGTTTCTGCATCAGTTGCCGCTGCAGAGAAGCCGTCGACGGCGCCGGAGATTGTTTTGGAACCCATCAGAGAAATCTCTGGTACAATTACCTTGCCTGGATCAAAGTCTTTGTCCAATCGGATTTTGCTTCTTGCTGCTCTCTCTGAGGGAACAACTGTTCTGGACAACTTGTTGAATAGTGAGGATGTTCATTACATGCTTGGTGCATTAAGGACACTTGGACTACGTGTGGAAGACGACAAAACAACCAAGCAAGCAATCGTGGAAGGCTGTGGGGGATTGTTTCCCACTGGTAAAGAATCCAAAGATGAAGTTAATTTATTCCTCGGAAATGCTGGTACTGCAATGCGTCCTTTGACAGCAGCTGTAACTGCTGCAGGTGGAAATGCAAGCTACATACTCGATGGTGTGCCCCGAATGAGAGAGAGGCCTATTGGGGATTTGGTGGCTGGTCTCAAGCAACTTGGTGCGGATGTTGATTGTTCTCTTGGCACAAACTGCCCACCTGTTCGTGTAAACGGGAAGGGAGGACTTCCGGGAGGAAAGGTGAAGCTGTCTGGATCAATTAGCAGTCAATACTTGACTGCTTTGCTTATGGCAGCTCCTTTGGCTCTTGGTGATGTGGAAATCGAGATTATTGATAAGCTCATTTCTGTTCCTTATGTTGAAATGACTTTGAAGTTAATGGAACGGTTTGGAGTTTCCGTGGAACACAGTAATGACTGGGACAGGTTTTTGGTCCGTGGAGGTCAAAAGTACAAGTCTCCTGGAAATGCTTTTGTTGAAGGCGATGCTTCAAGTGCAAGTTACTTCCTAGCAGGTGCTGCAGTTACCGGTGGAACTATCACCGTTCAAGGCTGTGGGACTAGCAGTTTGCAGGGAGACGTAAAATTCGCTGAAGTTCTTGAAAAGATGGGAGCTAAAGTTTCATGGACAGAGAACAGTGTCACTGTTACTGGGCCACCCCGAGACCCTTCAGGTCGAAAAGTCTTAAAAGGGGTTGACGTCAATATGAACAAGATGCCAGATGTTGCCATGACACTTGCAGTAGTTGCACTATTTGCTAATGGACCCACTGCTATAAGAGATGTGGCTAGTTGGAGAGTTAAGGAGACAGAGAGAATGATAGCAATCTGCACTGAACTGACCAAGCTAGGAGCAACAGTTGAAGAGGGTCCTGATTACTGTTTGATAACTCCACCTGAGAAACTGAAAATCACAACTATAGACACATATGATGATCATAGAATGGCAATGGCATTTTCTCTTGCGGCTTGCGGCGATGTTCCCGTAACCATCAATGATCCTGGTTGCACCAGGAAAACATTCCCTGACTACTTCCAAGTCCTTGAGAGGTTTACAAAGCATTAA 1566 0.4502 MAQVTRIHNGLQITQNFHQIPNSHKPHLPNSVSLKSHLWGSSKSLSLKHKNGGFMANKGNSCVVRVSASVAAAEKPSTAPEIVLEPIREISGTITLPGSKSLSNRILLLAALSEGTTVLDNLLNSEDVHYMLGALRTLGLRVEDDKTTKQAIVEGCGGLFPTGKESKDEVNLFLGNAGTAMRPLTAAVTAAGGNASYILDGVPRMRERPIGDLVAGLKQLGADVDCSLGTNCPPVRVNGKGGLPGGKVKLSGSISSQYLTALLMAAPLALGDVEIEIIDKLISVPYVEMTLKLMERFGVSVEHSNDWDRFLVRGGQKYKSPGNAFVEGDASSASYFLAGAAVTGGTITVQGCGTSSLQGDVKFAEVLEKMGAKVSWTENSVTVTGPPRDPSGRKVLKGVDVNMNKMPDVAMTLAVVALFANGPTAIRDVASWRVKETERMIAICTELTKLGATVEEGPDYCLITPPEKLKITTIDTYDDHRMAMAFSLAACGDVPVTINDPGCTRKTFPDYFQVLERFTKH* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0751 521 PANTHER 3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE, CHLOROPLASTIC 1 521 - -
Lan1g0751 521 ProSitePatterns EPSP synthase signature 2. 433 451 IPR023193 -
Lan1g0751 521 PANTHER AROM/DEHYDROQUINATE SYNTHASE 1 521 - -
Lan1g0751 521 SUPERFAMILY EPT/RTPC-like 82 517 IPR013792 GO:0003824
Lan1g0751 521 Pfam EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 85 515 IPR001986 GO:0016765
Lan1g0751 521 Gene3D Enolpyruvate transferase domain 98 310 IPR036968 GO:0016765
Lan1g0751 521 Hamap 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 88 521 IPR006264 GO:0003866|GO:0009073
Lan1g0751 521 Gene3D Enolpyruvate transferase domain 316 518 IPR036968 GO:0016765
Lan1g0751 521 TIGRFAM aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 92 520 IPR006264 GO:0003866|GO:0009073
Lan1g0751 521 CDD EPSP_synthase 90 518 IPR006264 GO:0003866|GO:0009073
Lan1g0751 521 ProSitePatterns EPSP synthase signature 1. 172 186 IPR023193 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0751 Lan-Chr1 17567091 17572822 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0751 K00800 - gmx:100789268 888.256