Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0727 ATGAAATTTGGTAAGAGATTGAAAAAACAGATTCAAGAGTCTTTTCCGGAATGGAGGGACAATTACTTGTCATACAAGAAAATGAAGAAGTTGGTAAAGTTGATATCTGGGTCACCCATGTTCATGAATGGGTCATTAGAGTATGGTAAGGTAGAGGCTGAGTTTGTGTATTTGTTGAACAATGAGATAGAAAAGTTCAATGGTTTTTTCATGGAAAAAGAGGAGGATTTCATCATCCTCCATGAGGAGTTACAACAAAGGATCAAAAGAGTAGTTGAATTATGGGGACCAAATGGCACTCAGCCTTCAAAAGTTGATTATAAGGAGGAGATGGCAAAAATCAGAAGAACTATTGTTGATTTCCATGGTGAAATGGTTCTCCTAGTAAACTATAGCAACATTAATTACACAGGATTGGCTAAAATTTTGAAGAAATATGACAAGAGAACAGGAGGGCTACTACGTTTACCATTCATTCAAAAAGTTCTAGAGCAACCCTTTTTCACAACCGATCTAATTTCCAAACTTGTGAAGGAATGTGAAAGAATAATTGATAATGTTTTCCCAACTGAAGAAGAAGAAGCTGAAAAAGCCAAAGAAGCTATTATAGTAGTAGGAGAAGGGATTTTTAGAAACACAGTTGCAGCTTTACTTACAATGCAAGAAATCAGAAAAGGTAGCTCTACTGAGAGCCCTTTTTCTCTTCCCCCTCTCAATATGCCAGATTCTGATCTTATCAGATCATTACAGCTCAATGCTGCAGTGCCCATTGTCCAGTGA 780 0.3692 MKFGKRLKKQIQESFPEWRDNYLSYKKMKKLVKLISGSPMFMNGSLEYGKVEAEFVYLLNNEIEKFNGFFMEKEEDFIILHEELQQRIKRVVELWGPNGTQPSKVDYKEEMAKIRRTIVDFHGEMVLLVNYSNINYTGLAKILKKYDKRTGGLLRLPFIQKVLEQPFFTTDLISKLVKECERIIDNVFPTEEEEAEKAKEAIIVVGEGIFRNTVAALLTMQEIRKGSSTESPFSLPPLNMPDSDLIRSLQLNAAVPIVQ* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0727 259 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 256 IPR031142 GO:0016036
Lan1g0727 259 Pfam SPX domain 1 35 IPR004331 -
Lan1g0727 259 Pfam SPX domain 99 161 IPR004331 -
Lan1g0727 259 ProSiteProfiles SPX domain profile. 1 160 IPR004331 -
Lan1g0727 259 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 256 - -
Lan1g0727 259 CDD SPX_AtSPX1_like 2 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0727 Lan-Chr1 16984350 16988036 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0727 - - gmx:100778590 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0168 12 2339571 2348595 Lan1g0727 1 16984350 16988036 LSH