Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0717 ATGGCTAGCAAGCTGTTTTTCCTGTCAATTATGTGCTTAGCACTTGGTGCAATCAGTCCGGCGGCCGAAGCCGCCGTGTCATGCGGTCAGGTGGTGAACAACCTGACCCCATGCGTTTCCTACGTAGTGTATGGTGGGAGCATAGTTCCTGAACAGTGCTGCAATGGGATCAGGAACCTGAATGGCATGGCTCAGAACACACCGGATCGCCAGAACGTGTGCAACTGCATCAAGAATGCTGTTAGTTCCAGTGGATTCAGTTTCTCTAATTTCAATCTCAACCTTGCTGCTGGCCTTCCTCAAAAATGTGGTGTTAACATTCCTTACCAGATCAGCCCTAATACTGATTGCCGCAGGGTTCGGTAA 366 0.4973 MASKLFFLSIMCLALGAISPAAEAAVSCGQVVNNLTPCVSYVVYGGSIVPEQCCNGIRNLNGMAQNTPDRQNVCNCIKNAVSSSGFSFSNFNLNLAAGLPQKCGVNIPYQISPNTDCRRVR* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0717 121 ProSitePatterns Plant lipid transfer proteins signature. 99 120 IPR000528 GO:0006869|GO:0008289
Lan1g0717 121 PANTHER - 5 119 IPR000528 GO:0006869|GO:0008289
Lan1g0717 121 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 10-RELATED 5 119 - -
Lan1g0717 121 PRINTS Plant phospholipid transfer protein signature 27 43 IPR000528 GO:0006869|GO:0008289
Lan1g0717 121 PRINTS Plant phospholipid transfer protein signature 48 62 IPR000528 GO:0006869|GO:0008289
Lan1g0717 121 PRINTS Plant phospholipid transfer protein signature 90 107 IPR000528 GO:0006869|GO:0008289
Lan1g0717 121 PRINTS Plant phospholipid transfer protein signature 108 119 IPR000528 GO:0006869|GO:0008289
Lan1g0717 121 Gene3D - 25 121 IPR036312 -
Lan1g0717 121 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 25 120 IPR036312 -
Lan1g0717 121 SMART aai_6 28 117 IPR016140 -
Lan1g0717 121 CDD nsLTP1 26 117 - -
Lan1g0717 121 Pfam Protease inhibitor/seed storage/LTP family 28 117 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0717 Lan-Chr1 16396328 16397619 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0717 4 121 Acyl Lipid Metabolism Gene Families AT2G38540 47.899 1.06e-31 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0717 - - gmx:100499726 183.726