Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0707 ATGGCTGGCATTGTGAAGTTAGCATGTGCAGTTCTTATATGCATGGTTGTGGTGAGTGCACCCTTAACTAAAGCTATCACATGTGGTCAGGTTACTGCTAACTTGGCCCAATGCCTTAACTATCTTCGAAGTGGTGGGGCTGTACCAGCACCTTGCTGCAATGGGATTAAGAACATATTGAATTTGGCAAAGACTACTCCGGACCGTCGCACAGCTTGCAACTGCTTGAAGGCAGCCGCTGCTAATACCCCTGGACTCAATCCTTCTAATGCTGGGTCACTACCAGGCAAATGTGGGGTTAACATCCCTTACAAGATTAGCACCTCCACTAATTGTGCTAGCATCAAGTGA 351 0.4729 MAGIVKLACAVLICMVVVSAPLTKAITCGQVTANLAQCLNYLRSGGAVPAPCCNGIKNILNLAKTTPDRRTACNCLKAAAANTPGLNPSNAGSLPGKCGVNIPYKISTSTNCASIK* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0707 116 PRINTS Plant phospholipid transfer protein signature 27 43 IPR000528 GO:0006869|GO:0008289
Lan1g0707 116 PRINTS Plant phospholipid transfer protein signature 47 61 IPR000528 GO:0006869|GO:0008289
Lan1g0707 116 PRINTS Plant phospholipid transfer protein signature 68 83 IPR000528 GO:0006869|GO:0008289
Lan1g0707 116 PRINTS Plant phospholipid transfer protein signature 85 102 IPR000528 GO:0006869|GO:0008289
Lan1g0707 116 PRINTS Plant phospholipid transfer protein signature 103 114 IPR000528 GO:0006869|GO:0008289
Lan1g0707 116 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 1 114 - -
Lan1g0707 116 ProSitePatterns Plant lipid transfer proteins signature. 94 115 IPR000528 GO:0006869|GO:0008289
Lan1g0707 116 SMART aai_6 28 112 IPR016140 -
Lan1g0707 116 CDD nsLTP1 26 112 - -
Lan1g0707 116 Gene3D - 25 116 IPR036312 -
Lan1g0707 116 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 26 114 IPR036312 -
Lan1g0707 116 Pfam Protease inhibitor/seed storage/LTP family 28 112 IPR016140 -
Lan1g0707 116 PANTHER - 1 114 IPR000528 GO:0006869|GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0707 Lan-Chr1 15795842 15797083 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0707 1 116 Acyl Lipid Metabolism Gene Families AT2G38540 53.782 1.51e-38 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0707 - - pper:18773511 162.54