Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0706 ATGGCAAGTGTTAAGGTAGCATGTGTGGTTCTGATGTGCATGGTTGTGGTGGGTGCACCCATTGCACATGCTACTATAACATGTGGACAGGTTGTTAGTGGCCTAGCTCCATGCCTCACTTACCTGCAGTCCGGTGGAGCTGTTCCTGGAACATGCTGCAACGGAGTCAAGGGACTCGTGGCGTTGGCTCAGAGCACTGCTGACAAACAAACAGCGTGCAATTGCCTCAAATCTGTGGCTGCTTCCACCCAATTTGATCCGGGGAATGCAGCATCACTACCAGACAAATGCGGGGTCAATCTCCCTTACAAGATCAGCACCTCCACTAATTGTAATACCATCAAGTTTTGA 351 0.5014 MASVKVACVVLMCMVVVGAPIAHATITCGQVVSGLAPCLTYLQSGGAVPGTCCNGVKGLVALAQSTADKQTACNCLKSVAASTQFDPGNAASLPDKCGVNLPYKISTSTNCNTIKF* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0706 116 ProSitePatterns Plant lipid transfer proteins signature. 93 114 IPR000528 GO:0006869|GO:0008289
Lan1g0706 116 Gene3D - 25 115 IPR036312 -
Lan1g0706 116 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 26 114 IPR036312 -
Lan1g0706 116 PANTHER - 1 113 IPR000528 GO:0006869|GO:0008289
Lan1g0706 116 Pfam Protease inhibitor/seed storage/LTP family 28 111 IPR016140 -
Lan1g0706 116 SMART aai_6 28 111 IPR016140 -
Lan1g0706 116 CDD nsLTP1 26 112 - -
Lan1g0706 116 PRINTS Plant phospholipid transfer protein signature 27 43 IPR000528 GO:0006869|GO:0008289
Lan1g0706 116 PRINTS Plant phospholipid transfer protein signature 47 61 IPR000528 GO:0006869|GO:0008289
Lan1g0706 116 PRINTS Plant phospholipid transfer protein signature 68 83 IPR000528 GO:0006869|GO:0008289
Lan1g0706 116 PRINTS Plant phospholipid transfer protein signature 84 101 IPR000528 GO:0006869|GO:0008289
Lan1g0706 116 PRINTS Plant phospholipid transfer protein signature 102 113 IPR000528 GO:0006869|GO:0008289
Lan1g0706 116 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 1 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0706 Lan-Chr1 15777265 15778796 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0706 4 115 Acyl Lipid Metabolism Gene Families AT2G38540 47.368 2.33e-34 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0706 - - lang:109350172 148.673