Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0672 ATGTCTCGAAGATATGATAGCCGTACAACAATCTTCTCCCCTGAAGGGCGTCTTTACCAAGTGGAGTATGCAATGGAAGCCATTGGAAATGCTGGCTCTGCAATAGGGATCTTATCAAAAGATGGGGTTGTGCTGGTTGGTGAAAAGAAGGTCACATCCAAGCTGCTGCAAACCTCAACTTCCACTGAGAAAATGTACAAGATTGATGATCATGTTGCATGTGCTGTGGCTGGGATAATGTCTGACGCCAACATCTTAATCAATACCGCTAGGGTCCAAGCGCAACGCTACTCACTCGCCTATCAAGAGCCTATGCCGGTTGAGCAGTTGGTTCAATCTCTCTGTGATACTAAGCAAGGGTACACCCAATTTGGTGGTCTTAGGCCATTTGGAGTCTCATTCCTGTTTGCAGGGTGGGACAAAAATTTCGGCTTTCAACTTTACATGAGTGACCCTAGTGGCAATTATGGTGGCTGGAAAGCTGGAGCTATTGGTGCAAATAACCAGGCTGCACAGTCAATTCTAAAACAGGACTACAAGGATGAAATCACAAGGGAAGAAGCAGTGCAACTTGCACTTAAGGTATTGAGTAAAACTATGGACAGCACAAGTCTGACCTCAGATAAGCTTGAACTGGCAGAGGTTTTTCTGTCACCTACCGGAAAGGTCAAGTATGAAGTTCATTCCCCAGAGTCCCTGACTAAGCTGTTGGTTAAGCATGGGGTCACCCAACCAGCAACAGACACTGCCTAG 753 0.4622 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYSLAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNFGFQLYMSDPSGNYGGWKAGAIGANNQAAQSILKQDYKDEITREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLSPTGKVKYEVHSPESLTKLLVKHGVTQPATDTA* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0672 250 CDD proteasome_alpha_type_4 3 215 - -
Lan1g0672 250 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 1 249 IPR029055 -
Lan1g0672 250 Pfam Proteasome subunit A N-terminal signature 5 27 IPR000426 GO:0006511|GO:0019773
Lan1g0672 250 ProSitePatterns Proteasome alpha-type subunits signature. 5 27 IPR000426 GO:0006511|GO:0019773
Lan1g0672 250 PANTHER PROTEASOME SUBUNIT ALPHA TYPE 1 248 IPR034647 GO:0019773
Lan1g0672 250 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 1 248 - -
Lan1g0672 250 Pfam Proteasome subunit 30 214 IPR001353 GO:0005839|GO:0051603
Lan1g0672 250 SMART Proteasome_A_N_2 5 27 IPR000426 GO:0006511|GO:0019773
Lan1g0672 250 ProSiteProfiles Proteasome alpha-type subunit profile. 20 237 IPR023332 -
Lan1g0672 250 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 226 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0672 Lan-Chr1 13537132 13543690 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0672 K02728 - gmx:102662733 469.544